Gene Information

Name : ECO26_5492 (ECO26_5492)
Accession : YP_003232356.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5579367 - 5580185 bp
Length : 819 bp
Strand : +
Note : Integrative element ECO26_IE09

DNA sequence :
ATGCGACTAGCCAGTCGTTTTGGTTATGCGAACCAGATACGCCGTGACCGTCCGCTGACACACGAAGAACTGATGCACTA
TGTGCCGGGGATTTTCGGGGAAGATAAACACACGTCCCGAAGCCAGAACTATACGTACATCCCCACCATCACCGTACTGG
AAAGCCTGCAGCGGGAAGGCTTTCAGCCATTCTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATACACA
AAACACATGCTGCGTCTGCGGCGGGCCGGAGAGATAAACGGAGAACATGTCCCTGAAATTATTCTGCTCAACTCTCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTCTGG
GGGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGCGTGTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACGCCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATTCAGGAGAATATGCTGAAAGGCGGAATTTCAGGTCGCAGCGCTAAAGGAAAA
CGTATCCATACCCGTGCCATTCACAGCATTGACACTGACATTAAGCTCAACCGCGTATTGTGGGTGATGGCGGAAACCCT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYANQIRRDRPLTHEELMHYVPGIFGEDKHTSRSQNYTYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRAIHSIDTDIKLNRVLWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-120 99
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-120 99
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-120 99
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-118 97
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-118 97
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 3e-118 96
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-114 94
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-114 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 8e-116 94
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-114 93
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 9e-112 91
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 9e-112 91
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-109 90
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-110 89
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-108 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 9e-72 54
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 3e-71 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_5492 YP_003232356.1 hypothetical protein VFG0658 Protein 8e-119 97
ECO26_5492 YP_003232356.1 hypothetical protein VFG1676 Protein 5e-116 94
ECO26_5492 YP_003232356.1 hypothetical protein VFG1526 Protein 8e-110 90
ECO26_5492 YP_003232356.1 hypothetical protein VFG1615 Protein 1e-108 89