Gene Information

Name : ECO26_5471 (ECO26_5471)
Accession : YP_003232339.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5558290 - 5558691 bp
Length : 402 bp
Strand : -
Note : Integrative element ECO26_IE09

DNA sequence :
ATGTACGCAAAATCCTTTCTCGCTCTTGATGGCAACGGACGTCTGACGGGCGCCCGTACAGCACAGGCCGCACCTTATGC
TCACTACACCTGCCACTTGTGTGGCAGTGCACTCAGATACCATCCGCAATACGACACTGAACTTCCCTGGTTTGAACACA
CTGACGACAGGCTGACAGAGCACGGTCAACAGTGCCCTTATGTCAGGCCGGAGCGCAGAGAAATACAGTTGATTAAACGT
CTGCAGCAATTCGTACCGGATGCCTTACCCGTGGTGCGTAAAGCCAGCTGGCACTGCAGACAATGTCACCACGATTATTA
TGGGGAGCAGTACTGCACACACTGCCAGACCGGAGGATTCAGTATTCCCCGGACAACTCAGGAGGAAATATGCGAATTCT
GA

Protein sequence :
MYAKSFLALDGNGRLTGARTAQAAPYAHYTCHLCGSALRYHPQYDTELPWFEHTDDRLTEHGQQCPYVRPERREIQLIKR
LQQFVPDALPVVRKASWHCRQCHHDYYGEQYCTHCQTGGFSIPRTTQEEICEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-59 98
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 3e-52 96
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 9e-57 94
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-56 92
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 1e-50 91
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 2e-50 91
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 2e-50 91
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 3e-50 90
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 2e-46 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_5471 YP_003232339.1 hypothetical protein VFG0645 Protein 6e-51 91