Gene Information

Name : ECO26_5405 (ECO26_5405)
Accession : YP_003232281.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 5490520 - 5490924 bp
Length : 405 bp
Strand : -
Note : predicted protein Orf1 in insertion sequence ISEc22

DNA sequence :
ATGAAATCATTAACCGCAGTGCGTAAAAAAAGCCCTAATTATCCCGTTGAGTTCAAAATCAAAATGGTTGAACTCTCGCA
TCGACCAGAGATCTCCGTAGCGCAACTCGCTCGTGAGCATGGGATCAACGATAATTTGCTGTTCAAGTGGCGCCAGTACT
GGCGCGAAGGAAAACTACGTCCTCCTTCAACAACAGAAAACAACGTGCCTGAGCTGCTCCCGATAACACTTGATGCCGAA
GATGTTGTCCCTACAACCTCCCCCCGGTCACAACCTGTAGCTGCTGCGACACCTGAATCACTCAATATCAGCTGTGAAGT
GACGTTCCGGCACGGATCACTCCGTCTGAATGGTGCCATCAGCGAAAATATCCTGAACCTGCTGATACGGGAGCTCAAAC
GTTGA

Protein sequence :
MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAE
DVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-58 100
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 1e-58 100
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 7e-29 56
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 1e-28 56
unnamed AAL99257.1 unknown Not tested LEE Protein 7e-29 56
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-29 56
unnamed AAC31492.1 L0013 Not tested LEE Protein 6e-29 56
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 9e-29 56
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 9e-29 56
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-28 56
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 3e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_5405 YP_003232281.1 hypothetical protein VFG1697 Protein 3e-59 100
ECO26_5405 YP_003232281.1 hypothetical protein VFG1518 Protein 4e-29 56
ECO26_5405 YP_003232281.1 hypothetical protein VFG1708 Protein 2e-29 56
ECO26_5405 YP_003232281.1 hypothetical protein VFG1053 Protein 9e-29 56
ECO26_5405 YP_003232281.1 hypothetical protein VFG0791 Protein 2e-29 56