Gene Information

Name : espB (ECO26_5285)
Accession : YP_003232167.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : translocator EspB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5361929 - 5362873 bp
Length : 945 bp
Strand : +
Note : Integrative element ECO26_IE08

DNA sequence : 
ATGAATACTATTGATTATACTAATCAAGTAATGACGGTTAATTCTGTTTCGGAGAATACTACCGGCTCTAATGCAATTAC
CGCATCTGCTATTAATTCATCTTTGCTTACCGATGGTAAGGTCGATGTTTCTAAACTGATGCTGGAAATTCAAAAACTCT
TGGGCAAGATGGTGCGTATATTGCAGGATTACCAACAGCAACAGTTGTCGCAGAGCTATCAGATCCAACTGGCCGTTTTT
GAGAGCCAGAATAAAGCCATTGATGAAAAAAAGGCCGCTGCAACAGCCGCTCTGGTTGGTGGGGCTATTTCATCAGTATT
GGGGATCTTAGGCTCTTTTGCAGCAATTAACAGTGCTACGAAAGGCGCGAGTGATATTGCTCAAAAAACCGCCTCTACAT
CTTCTAAGGCTATTGATGCGGCTTCTGATACTGCGACTAAAACGTTGACTAAGGCAACGGAAAGCGTTGCTGATGCTGTT
GAAGATGCATCCAGCGTGATGCAGCAAGCGATGACTACAGCAACGAGAGCGGCCAGCCGTACATCCGACGTTGCTGATGA
CATTGCCGATTCTGCTCAGAGAGCTTCTCAGCTGGCTGAAAACGCTGCAGATGCCGCTCAGAAGGCAAGTCGGGCAAGCC
GCTTTATGGCTGCAGTAGATAAGATTACTGGCTCTACACCATTTATTGCCGTTACCAGTCTTGCCGAAGGCACGAAGACA
TTGCCAACAACGGTATCTGAATCAGTCAAATCTAACCATGAGATTAGCGAACAGCGTTATAAGTCTGTGGAGAACTTCCA
GCAGGGTAATTTGGATCTGTATAAGCAAGAAGTTCGCAGAGCGCAGGATGATATCGCTAGCCGTCTGCGTGATATGACAA
CAGCCGCTCGCGATCTCACTGATCTTCAGAATCGTATGGGTCAATCGGTTCGCTTAGCTGGGTAA

Protein sequence : 
MNTIDYTNQVMTVNSVSENTTGSNAITASAINSSLLTDGKVDVSKLMLEIQKLLGKMVRILQDYQQQQLSQSYQIQLAVF
ESQNKAIDEKKAAATAALVGGAISSVLGILGSFAAINSATKGASDIAQKTASTSSKAIDAASDTATKTLTKATESVADAV
EDASSVMQQAMTTATRAASRTSDVADDIADSAQRASQLAENAADAAQKASRASRFMAAVDKITGSTPFIAVTSLAEGTKT
LPTTVSESVKSNHEISEQRYKSVENFQQGNLDLYKQEVRRAQDDIASRLRDMTTAARDLTDLQNRMGQSVRLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espB YP_003232167.1 translocator EspB Virulence LEE Protein 2e-96 100
espB AAK26729.1 EspB Virulence LEE Protein 2e-96 100
espB AAL57556.1 EspB Virulence LEE Protein 2e-96 100
espB CAI43860.1 EspB protein Virulence LEE Protein 5e-95 99
espB YP_003223461.1 translocon EspB Virulence LEE Protein 8e-96 99
espB CAC81876.1 EspB protein Not tested LEE II Protein 2e-96 99
espB AAC38396.1 EspB Virulence LEE Protein 5e-60 72
espB AAC31499.1 L0020 Virulence LEE Protein 1e-60 70
espB NP_290254.1 hypothetical protein Virulence LEE Protein 3e-61 70
espB ACU09444.1 secreted protein EspB Virulence LEE Protein 3e-61 70
ECs4554 NP_312581.1 protein EspB Virulence LEE Protein 3e-61 70
espB YP_003236074.1 translocon EspB Virulence LEE Protein 7e-60 70
unnamed AAL06383.1 EspB Virulence LEE Protein 2e-61 65
espB AFO66308.1 putative secreted protein EspB Not tested SESS LEE Protein 1e-43 51
espB AFO66387.1 putative secreted protein EspB Virulence SESS LEE Protein 1e-43 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espB YP_003232167.1 translocator EspB VFG0744 Protein 3e-60 72
espB YP_003232167.1 translocator EspB VFG0798 Protein 1e-61 70