Gene Information

Name : ECO26_5272 (ECO26_5272)
Accession : YP_003232154.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : T3SS component protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5348286 - 5348663 bp
Length : 378 bp
Strand : +
Note : Integrative element ECO26_IE08

DNA sequence :
ATGTTGGACAGAATTTTATCTATTCGTAAAAGCAGAGCGAATCGATTGAGAGAATCAATGGCTAAGATTAACTCTCAGAT
AAAAGAGGTGGATGGTAAACTCGATGACTGCGAGCAAGCCATTAAAGAGTCGATTGCCTCTAAGCAGGCGTATTGTGCAT
CGCTGGTGAATCTGGATAAAGTGTCGTTGTATAAATACCAGATTAAAAACAATGCATTTGATGAGCAAAAGCAGCGATTA
TATGAGAAAAAATCCTCACTTTCTAAAGAAAAGCGTTCATTGCTCGATTCACAAAAACGAACAAAAGAGGATCTACAACA
TGTTAATAAATCAATAGAGAAATTATCTTTTGCCATAAAGGAACATTACTTTGACTAG

Protein sequence :
MLDRILSIRKSRANRLRESMAKINSQIKEVDGKLDDCEQAIKESIASKQAYCASLVNLDKVSLYKYQIKNNAFDEQKQRL
YEKKSSLSKEKRSLLDSQKRTKEDLQHVNKSIEKLSFAIKEHYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st25 CAC81863.1 ST25 protein Not tested LEE II Protein 3e-41 100
unnamed CAI43873.1 hypothetical protein Not tested LEE Protein 3e-41 100
ECO26_5272 YP_003232154.1 T3SS component protein Virulence LEE Protein 4e-41 100
unnamed AAK26716.1 unknown Not tested LEE Protein 2e-40 99
unnamed AAL57543.1 unknown Not tested LEE Protein 2e-40 99
ECO103_3617 YP_003223474.1 T3SS component Virulence LEE Protein 7e-41 99
unnamed ACU09457.1 ST25 protein Not tested LEE Protein 5e-41 98
ECs4567 NP_312594.1 hypothetical protein Not tested LEE Protein 7e-41 98
unnamed AAC38384.1 Orf15 Not tested LEE Protein 5e-41 98
unnamed AAC31512.1 L0033 Not tested LEE Protein 5e-41 98
Z5118 NP_290267.1 hypothetical protein Not tested LEE Protein 7e-41 98
ECO111_3751 YP_003236087.1 putative T3SS component protein Virulence LEE Protein 5e-41 97
unnamed AAL06370.1 unknown Not tested LEE Protein 6e-38 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_5272 YP_003232154.1 T3SS component protein VFG0811 Protein 2e-41 98
ECO26_5272 YP_003232154.1 T3SS component protein VFG0731 Protein 2e-41 98