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Name : escV (ECO26_5270) Accession : YP_003232152.1 Strain : Escherichia coli 11368 Genome accession: NC_013361 Putative virulence/resistance : Virulence Product : T3SS structure protein EscV Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 5344932 - 5346959 bp Length : 2028 bp Strand : + Note : Integrative element ECO26_IE08 DNA sequence : ATGAATAAACTCTTAAATATATTTAAAAAAGCAGAGTCATATCACGATCTTATTCTGGCTCTCTTCTTCTTTATGGCTGT AATGATGATGATTATTCCATTGCCAACAGTTGTGGTGGATATCATTATCGCGATTAATATATCGACAGCGTTGCTTTTAT TAATGCTCTCAATCTATATAAAAAATCCTCTTGAGCTAACTTCTTTTCCTACAATCCTGTTGATTACGACGTTGATGCGC CTGTCGCTCAGTGTTAGTACAACCAGACTTATTCTGCTGCATCACGATGCGGGTGACATTATTTACTCCTTCGGTAACTT TGTTGTTGGCGGTAATATTGTTGTTGGCCTGGTTATTTTTACCATTATCACCATTGTACAATTTATGGTTATTACAAAAG GGGCTGAGCGTGTTGCTGAAGTGAGTGCTCGTTTTTCCCTTGATGGTATGCCAGGAAAACAAATGAGTATTGATGGTGAT ATGCGCGCAGGCGTTATTGATCCGCTTGAGGCAAAAGTTCTTCGCTCCCGAGTGCAAAAGGAAAGCCAGTTTTATGGTTC AATGGACGGGGCGATGAAGTTTGTAAAAGGGGACGCTATTGCCGGTATCATCATTGTTTTAGTTAACCTGTTTGGTGGCG TGCTCATTGGAATGTGGCAATTTGACATGCCATTTAGTGAAGCACTTAGCCTGTTTTCTGTATTGTCTGTCGGTGATGCT TTGGTTGCCCAGATCCCTGCGCTTATTATTTCCGTCACTGCGGGGGTTGTTGTTACTCGTGTTCCCGGTGAAAGCGAAAA AGAAGAAAACCTTGCAGGTGATATTGTTCAACAGGTTTCTGTTAATAGTCGCCCTTTTTTAATCAGTGCCGCACTCATGA TCGTAATGGCGATTATTCCTGGCTTTCCTACATTGGTCTTCTTGTTTCTGGCGGTTTGCCTGTTGGGTATCGCCTGGAAA TTACAAAAGAAAAGAACGTTTGGAACCGGAAATAATAAGGACGCTATGGGAGCTGATTTGTCTAATAGTCAAAATATCTC ACCGGGTGCCGAGCCGTTGATTTTAAACTTAAGTAGTAATATTTATAGCTCAGATATTACACAGCAGATTGAGGTTATGC GTTGGAATTTCTTTGAGGAAAGTGGAATTCCATTGCCTAAGATTATTGTTAATCCAGTTAAAAATAATGATAGCGCTATA GAATTTTTGCTCTATCAAGAGTCAATATACAAAGATACTCTTACAGATGATACTGTTTATTTTGAGGCTGGGCATGCAGA GATATCATTTGAATTTGTCCAGGAAAAGCTTTCGGCTAACTCTATCGTGTATAAAACGAATGAGGCTAACCAACAACTAG CTCACGTCTCAGGTATGGATGTTTATGCAAAAACAAATGACAAGATAACGTTTTTGCTAAAGAAACTTGTATTGTCTAAT GCCAAAGAGTTCATCGGCGTACAAGAAACGCGTTATCTGATGGACATCATGGAGAGGAAATATAACGAACTTGTGAAAGA GCTTCAGCGTCAGCTTGGTCTGAGCAAGATTGTGGATATTCTTCAGCGTCTCGTAGAGGAAAATATCTCAATTAGAGATC TACGAACTATTTTTGAAACGCTTATTTTTTGGTCCACAAAAGAAAAAGATGTGGTTATCTTGTGCGAATACGTTCGTATC GCCCTCCGTCGGCATATTTTAGGTCGCTATAGCGTTCGCGGTACACTTCTGAATGTCTGGCTTATTGGCTCTGATATTGA AAATGAGTTACGAGAGTCGATCAGACAAACGTCATCAGGTTCGTATTTGAATATCTCACCGGAGCGAAGTGAGCAGATTA TTGGCTTCTTAAAAAATATTGTGAATCCAACGGGGAATGGCGTCATTCTGACCGCTTTAGATATCAGGCGCTATGTGAAG AAAATGATTGAAGGTTCGTTCCCGTCAGTCCCCGTGCTCTCTTTTCAGGAAGTTGGGAATAATATCGAACTTAAAGTATT AGGAACGGTAAATGATTTTAGAGCATGA Protein sequence : MNKLLNIFKKAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMR LSLSVSTTRLILLHHDAGDIIYSFGNFVVGGNIVVGLVIFTIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGD MRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSEALSLFSVLSVGDA LVAQIPALIISVTAGVVVTRVPGESEKEENLAGDIVQQVSVNSRPFLISAALMIVMAIIPGFPTLVFLFLAVCLLGIAWK LQKKRTFGTGNNKDAMGADLSNSQNISPGAEPLILNLSSNIYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKNNDSAI EFLLYQESIYKDTLTDDTVYFEAGHAEISFEFVQEKLSANSIVYKTNEANQQLAHVSGMDVYAKTNDKITFLLKKLVLSN AKEFIGVQETRYLMDIMERKYNELVKELQRQLGLSKIVDILQRLVEENISIRDLRTIFETLIFWSTKEKDVVILCEYVRI ALRRHILGRYSVRGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERSEQIIGFLKNIVNPTGNGVILTALDIRRYVK KMIEGSFPSVPVLSFQEVGNNIELKVLGTVNDFRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escV | YP_003232152.1 | T3SS structure protein EscV | Virulence | LEE | Protein | 0.0 | 100 |
| escV | AAK26714.1 | EscV | Virulence | LEE | Protein | 0.0 | 100 |
| escV | AAL57541.1 | EscV | Virulence | LEE | Protein | 0.0 | 100 |
| escV | AAC38382.1 | EscV | Virulence | LEE | Protein | 0.0 | 99 |
| escV | CAI43875.1 | EscV protein | Virulence | LEE | Protein | 0.0 | 99 |
| escV | CAC81861.1 | EscV protein | Virulence | LEE II | Protein | 0.0 | 99 |
| escV | YP_003236089.1 | putative translocator EscV | Virulence | LEE | Protein | 0.0 | 99 |
| escV | YP_003223476.1 | translocator EscV | Virulence | LEE | Protein | 0.0 | 99 |
| escV | NP_290269.1 | hypothetical protein | Virulence | LEE | Protein | 0.0 | 98 |
| ECs4569 | NP_312596.1 | hypothetical protein | Virulence | LEE | Protein | 0.0 | 98 |
| escV | AAC31514.1 | L0035 | Virulence | LEE | Protein | 0.0 | 98 |
| escV | ACU09459.1 | EscV protein | Virulence | LEE | Protein | 0.0 | 98 |
| unnamed | AAL06368.1 | EscV | Virulence | LEE | Protein | 0.0 | 96 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 0.0 | 79 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 0.0 | 79 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 1e-123 | 49 |
| ssaV | NP_456114.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 6e-130 | 49 |
| ssaV | NP_805085.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 6e-130 | 49 |
| ssaV | CAA70536.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 2e-130 | 49 |
| ssaV | NP_460379.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 2e-130 | 49 |
| ssaV | YP_216422.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 2e-130 | 49 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 1e-93 | 42 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 1e-112 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| escV | YP_003232152.1 | T3SS structure protein EscV | VFG0729 | Protein | 0.0 | 99 |
| escV | YP_003232152.1 | T3SS structure protein EscV | VFG0813 | Protein | 0.0 | 98 |
| escV | YP_003232152.1 | T3SS structure protein EscV | VFG0514 | Protein | 1e-130 | 49 |
| escV | YP_003232152.1 | T3SS structure protein EscV | VFG1006 | Protein | 9e-95 | 42 |
| escV | YP_003232152.1 | T3SS structure protein EscV | VFG0384 | Protein | 2e-110 | 42 |
| escV | YP_003232152.1 | T3SS structure protein EscV | VFG1780 | Protein | 2e-98 | 41 |
| escV | YP_003232152.1 | T3SS structure protein EscV | VFG0064 | Protein | 5e-109 | 41 |
