Gene Information

Name : grlA (ECO26_5262)
Accession : YP_003232144.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : positive regulator GrlA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5339794 - 5340207 bp
Length : 414 bp
Strand : +
Note : Integrative element ECO26_IE08

DNA sequence :
ATGGGATCTAAAAATAAAAATGGCGACTATGTAATTCCTGACTCAGTAAAGAATTACGATGGTGAGCCTCTGTATATCTT
GGTTTCTCTTTGGTGTAAATTGCAGGAGAAATGGATTTCTCGCAATGATATTGCCGAAGCATTCGGTATAAACCTGAGGA
GAGCATCATTTATTATAACTTATATATCGAGAAGAAAAGAAAAAATTTCATTTCGTGTCAGATATGTTAGTTATGGTAAC
TTGCATTATAAGCGCCTTGAGATTTTCATTTATGATGTTAACCTCGAGGCTGTTCCGATAGAAAGTCCGGTATCAACCGG
ACCAAAAAGAAAAAACTACCGAGTCGGTAATGGTATTGTGGGGCAGTCTAATATCTGGAACGAAATGATCATGAGGCGGA
AAAAGGAGAATTAA

Protein sequence :
MGSKNKNGDYVIPDSVKNYDGEPLYILVSLWCKLQEKWISRNDIAEAFGINLRRASFIITYISRRKEKISFRVRYVSYGN
LHYKRLEIFIYDVNLEAVPIESPVSTGPKRKNYRVGNGIVGQSNIWNEMIMRRKKEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK26706.1 unknown Not tested LEE Protein 1e-59 100
grlA YP_003232144.1 positive regulator GrlA Not tested LEE Protein 2e-59 100
unnamed AAL57533.1 unknown Not tested LEE Protein 6e-59 100
st15 CAC81853.1 ST15 protein Not tested LEE II Protein 6e-59 100
grlA YP_003223484.1 positive regulator GrlA Not tested LEE Protein 5e-59 99
unnamed CAI43883.1 hypothetical protein Not tested LEE Protein 1e-58 99
grlA YP_003236097.1 positive regulator GrlA Not tested LEE Protein 6e-58 97
unnamed AAC38375.1 Orf11 Not tested LEE Protein 4e-58 97
Z5128 NP_290277.1 hypothetical protein Not tested LEE Protein 3e-58 97
unnamed AAC31522.1 L0043 Not tested LEE Protein 2e-58 97
ECs4577 NP_312604.1 hypothetical protein Not tested LEE Protein 3e-58 97
unnamed ACU09467.1 regulatory protein GrlA Virulence LEE Protein 2e-58 97
unnamed AAL06360.1 unknown Not tested LEE Protein 1e-54 92
grlA AFO66406.1 putative LEE-encoded positive regulator of transcription Virulence SESS LEE Protein 7e-39 62
grlA AFO66330.1 putative LEE-encoded positive regulator of transcription Not tested SESS LEE Protein 7e-39 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
grlA YP_003232144.1 positive regulator GrlA VFG0821 Protein 9e-59 97
grlA YP_003232144.1 positive regulator GrlA VFG0721 Protein 2e-58 97