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Name : escU (ECO26_5259) Accession : YP_003232141.1 Strain : Escherichia coli 11368 Genome accession: NC_013361 Putative virulence/resistance : Virulence Product : secretion system apparatus protein SsaU Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 5337674 - 5338711 bp Length : 1038 bp Strand : + Note : member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli DNA sequence : ATGAGTGAAAAAACAGAAAAGCCCACACCCAAAAAACTAAGGGATCTAAAAAAGAAGGGCGATGTAACAAAAAGTGAAGA GGTAATGGCTGCAGTGCAGTCATTAATCTTATTTTCATTTTTTTCTTTATATGGTGCGAGTTTTTTCGTTGAGGTTGTTG AGTTAGTTAATACGACTATAGACTCGCTAAATAGACCGTTTTTGTATGCCATTCGTGAAATATTAGGTGCGGTATTAAAC ATATTTTTATTGTATATTTTGCCAATTTCTTTGATTGTCTTTGTTGGAACTGTTACAACTGGTGTATCACAAACAGGATT CATCTTTGCGGTTGAAAAAATAAAACCATCGGCTCAGAAGATTAGTGTAAAAAATAACCTGAAAAATATTTTTTCTGTAA AGAGTATTTTTGAGCTGCTTAAGTCAGTATTTAAGTTAGTGATAATTACTCTCATTTTTTACTTTATGGGGCATTCATAT GCAAATGAGTTTGCAAATTTCACAAGACTGAACGCATATCAAACTCTTGTCGTTGTTGCCTTTTTTGTTTTTCTTTTATG GAAAGGCGTGTTATTCGGATATCTACTCTTTTCAGTATTTGATTTCTGGTTCCAGAAGCATGAGGGACTGAAGAAAATGA AAATGAGTAAAGATGAGGTGAAACGAGAAGCCAAGGATACTGATGGTAACCCTGAAATTAAAGGGGAGCGCCGTCGCCTT CATTCTGAGATACAAAGTGGAAGTCTGGCTAATAACATCAAAAAATCAACCGTGATCGTCAAAAACCCGACTCACATTGC GATTTGCCTATACTATAAACTCGGGGAGACTCCATTGCCTTTAGTTATTGAAACAGGAAAAGATGCCAAAGCTCTACAGA TCATTAAACTGGCTGAACTCTATGATATTCCAGTGATTGAAGATATTACTTTGGCAAGAAGTCTTTATAAGAACATACAT AAAGGACAATACATAACAGAAGACTTTTTTGAACCTGTAGCACAATTGATTCGTATAGCAATAGATCTTGATTATTAA Protein sequence : MSEKTEKPTPKKLRDLKKKGDVTKSEEVMAAVQSLILFSFFSLYGASFFVEVVELVNTTIDSLNRPFLYAIREILGAVLN IFLLYILPISLIVFVGTVTTGVSQTGFIFAVEKIKPSAQKISVKNNLKNIFSVKSIFELLKSVFKLVIITLIFYFMGHSY ANEFANFTRLNAYQTLVVVAFFVFLLWKGVLFGYLLFSVFDFWFQKHEGLKKMKMSKDEVKREAKDTDGNPEIKGERRRL HSEIQSGSLANNIKKSTVIVKNPTHIAICLYYKLGETPLPLVIETGKDAKALQIIKLAELYDIPVIEDITLARSLYKNIH KGQYITEDFFEPVAQLIRIAIDLDY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escU | CAC81850.1 | EscU protein | Virulence | LEE II | Protein | 3e-144 | 100 |
| escU | YP_003232141.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 5e-144 | 100 |
| escU | CAI43886.1 | EscU protein | Virulence | LEE | Protein | 9e-144 | 99 |
| escU | AAK26703.1 | EscU | Virulence | LEE | Protein | 9e-144 | 99 |
| escU | YP_003223487.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 1e-143 | 99 |
| escU | AAL57530.1 | EscU | Virulence | LEE | Protein | 9e-144 | 99 |
| escU | AAC31525.1 | L0046 | Virulence | LEE | Protein | 2e-141 | 98 |
| escU | NP_290280.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 3e-141 | 98 |
| escU | ACU09470.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 2e-141 | 98 |
| ECs4580 | NP_312607.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 3e-141 | 98 |
| escU | AAC38372.1 | EscU | Virulence | LEE | Protein | 2e-141 | 98 |
| escU | YP_003236100.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 2e-141 | 98 |
| unnamed | AAL06357.1 | EscU | Virulence | LEE | Protein | 7e-137 | 92 |
| escU | AFO66307.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-113 | 75 |
| escU | AFO66403.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-113 | 75 |
| YPO0273 | YP_002345355.1 | secretion system apparatus protein SsaU | Virulence | Not named | Protein | 6e-58 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| escU | YP_003232141.1 | secretion system apparatus protein SsaU | VFG0718 | Protein | 1e-141 | 98 |
| escU | YP_003232141.1 | secretion system apparatus protein SsaU | VFG0824 | Protein | 1e-141 | 98 |
