Gene Information

Name : escT (ECO26_5258)
Accession : YP_003232140.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : T3SS structure protein EscT
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 5336905 - 5337681 bp
Length : 777 bp
Strand : +
Note : Integrative element ECO26_IE08

DNA sequence : 
ATGAATGAAATAATGACGGTCATAGTATCATCATTTTTTTGTATACTCAGGCCGCTGGGGATGTTTATTATTCTACCAAT
ATTTTCAACAGGTGTTTTGCTCAGTAACTTTATACGCAACTCAATTATGATTGCGTTTACACTTCCAATTATAGTAGAGA
ACTATACATTTTCGGAAAAATTACCATCCGGAATTTTTCAGTTGACAGGCATAGTGCTAAAAGAAATAAGTATAGGCTTT
TTCATTGGGTTATCATTTACTATTCTTTTTTGGGCAATAGATGCGGCTGGGCAGATTATTGATACTTTAAGAGGTTCAAC
AATATCTTCAATTTTTAACCCGTCTATAAGTGATTCATCTTCTATCACTGGTGTTATTTTATACCAATTTATCACTGTGA
TCTTTGTTATTCATGGTGGGATACAAAGCGTTCTGGATAAGTTGTATTTATCCTACGAGATATTACCATTACAAGCCGAT
ATTGCATTCAATCGTGCTTTAGTAGATTTTTTATTTTCGCTATGGGATTCATTTATTAAACTGATGTTATCATTTTCAAT
TCCCATGATTATCGGTATCTTCTTATGTGATATGGGGTTTGGGTTTCTCAATAAAACAGCGCCTCAGCTAAACGTATTCA
CATTATCACTGCCGGTAAAAAGTTTGATAGCAATCTTTATATTGTTATTAGTTATTCATGTTTTCCCTGATTTTATTACG
GCAAATATTCATTCTGACATAATTGACAGATCGTTACCGAGCATGATTAATGAGTGA

Protein sequence : 
MNEIMTVIVSSFFCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEKLPSGIFQLTGIVLKEISIGF
FIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSSSITGVILYQFITVIFVIHGGIQSVLDKLYLSYEILPLQAD
IAFNRALVDFLFSLWDSFIKLMLSFSIPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT
ANIHSDIIDRSLPSMINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escT AAK26702.1 EscT Virulence LEE Protein 2e-107 100
escT YP_003223488.1 T3SS structure protein EscT Virulence LEE Protein 3e-107 100
escT AAL57529.1 EscT Virulence LEE Protein 2e-107 100
escT YP_003232140.1 T3SS structure protein EscT Virulence LEE Protein 3e-107 100
escT CAC81849.1 EscT protein Virulence LEE II Protein 2e-107 100
escT CAI43887.1 EscT protein Virulence LEE Protein 2e-107 100
escT AAC38371.1 EscT Virulence LEE Protein 7e-107 99
ECs4581 NP_312608.1 EscT Virulence LEE Protein 2e-106 98
escT AAC31526.1 L0047 Virulence LEE Protein 2e-106 98
escT YP_003236101.1 putative T3SS structure protein EscT Virulence LEE Protein 2e-106 98
escT ACU09471.1 type III secretion apparatus protein SpaR/YscT/HrcT Virulence LEE Protein 2e-106 98
escT NP_290281.1 hypothetical protein Virulence LEE Protein 2e-106 98
unnamed AAL06356.1 EscT Virulence LEE Protein 9e-104 93
escT AFO66312.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-80 71
escT AFO66402.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-80 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
escT YP_003232140.1 T3SS structure protein EscT VFG0717 Protein 4e-107 99
escT YP_003232140.1 T3SS structure protein EscT VFG0825 Protein 1e-106 98