Gene Information

Name : ECO26_5252 (ECO26_5252)
Accession : YP_003232134.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : T3SS component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5334197 - 5334415 bp
Length : 219 bp
Strand : +
Note : Integrative element ECO26_IE08

DNA sequence : 
ATGATAACGATAACTGAACTGGAAGACGAAATAATAAAAAATAAAGAAGCCGCAAATATTTTCATTGAAAAAATAAACGA
CAAAAAGAACGAAATCCATGAAAAAATGAAACACCCCTTGGATAAAGTTACCTACAATGAAGCAAAGGAACTGCTCATTG
CCTGCGATGCGGCAATCAGGATCATAGAGATAATGCTAATCAGAATTAATAATAAATAG

Protein sequence : 
MITITELEDEIIKNKEAANIFIEKINDKKNEIHEKMKHPLDKVTYNEAKELLIACDAAIRIIEIMLIRINNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK26697.1 unknown Not tested LEE Protein 3e-20 100
unnamed AAL57524.1 unknown Not tested LEE Protein 3e-20 100
unnamed AAL57585.1 unknown Not tested LEE Protein 3e-20 100
st06 CAC81844.1 ST06 protein Not tested LEE II Protein 3e-20 100
ECO103_3637 YP_003223494.1 T3SS component Virulence LEE Protein 4e-20 100
unnamed CAI43892.1 hypothetical protein Not tested LEE Protein 3e-20 100
ECO26_5252 YP_003232134.1 T3SS component Virulence LEE Protein 4e-20 100
unnamed AAC38365.1 Orf2 Not tested LEE Protein 3e-20 99
ECO111_3771 YP_003236107.1 T3SS component Virulence LEE Protein 4e-20 99
unnamed AAC31532.1 L0053 Not tested LEE Protein 3e-20 99
Z5139 NP_290287.1 hypothetical protein Not tested LEE Protein 4e-20 99
unnamed ACU09477.1 type III secretion system protein YseE family Virulence LEE Protein 3e-20 99
ECs4587 NP_312614.1 hypothetical protein Not tested LEE Protein 5e-20 97
unnamed AAL06350.1 unknown Not tested LEE Protein 6e-19 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_5252 YP_003232134.1 T3SS component VFG0711 Protein 1e-20 99
ECO26_5252 YP_003232134.1 T3SS component VFG0831 Protein 1e-20 99