|
Name : ECO26_4941 (ECO26_4941) Accession : YP_003231837.1 Strain : Escherichia coli 11368 Genome accession: NC_013361 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 4965243 - 4966412 bp Length : 1170 bp Strand : - Note : Prophage ECO26_P20 DNA sequence : ATGGCTCTAACCGATATACAGATCAAACGTGCAAAACCACAAGACAAACCATACACATTGAACGATGGACAAGGTCTGTC ATTGCTTATCAATCCTGATGGCTCGAAAGGCTGGCGTTTCCGTTTCCGGTTTGCAGGGAAAGCGCGTTTAATGTCATTTG GCAGCTACGATTTAGTAAGCCTCGCAGAAGCACGTGAAAAGCGTGATATCGCCCGTAAGCAGGTTGCTAATGGCATTGAC CCGGTAGAAGAACGTAAAGCTCAGAAACTTGCTCAGAAATTATCCACTAAAAACTCTTTTGAGAGCGTTAGCAGAGAATG GCATGCAGCAAAAGCAGATCGTTGGACCTTAGCTTATCGAGAAGAAATTATTAAAACATTTGAACAGGATGTTTTTCCTT TCATTGGTAAACGACCAATAGCTGAAATTAAACCCCTAGAACTGCTTGAAGTACTTAAACGCATAGAAAAACGTGGAGCG TTGGAGAAAACAAGAAAAGTACGCCAACGGTGCGGAGAAGTGTTTCGCTACGCGATCATCACTGGCCGCGCTGAATACAA TCCAGCACCTGATTTAGCTATCGCATTAGCAGTGCCGAAGCAAAAACATCATCCTTTTCTATCAGCAGAGGAACTCCCAC ATTTTGTCAGAGATCTTGAGGCATACACTGGCAGCATAATCACTAAAAATGCAACCAAGATTGTGATGCTTACAGGTGTT CGAACACAAGAGATGCGCTTTGCTACATGGCAAGAGCTTGATTTAGAAAAAGGGCTATGGGAGATACCAGCAGAGCGTAT GAAGATGCGTAGGCCACACATAGTCCCGCTTTCAAGGCAGGTTATAAGGCTATTTCAACAACTAAAACCGATCACTGGTC ACTATCCTTACATTTTCATTGGACGAAATAACCGAAAAAAGCCTATAAGTAAGGAGAGCATAAACCAAGTGATTGAGTTA TTGGGATTTAAGGGGAGAATCACTGGCCATGGTTTCAGACACACTATGTCAACCATACTACACGAAGCCGGTTTTAATAG TGCATGGATTGAAATGCAACTTGCCCACGTTGATAAGAACAGCATTCGCGGTGTATACAATCATGCACAATATCTTAATG GTCGATCTCGTATGCTTCAGTTTTATGCAGATAAACTATACCCAAACTGA Protein sequence : MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVSLAEAREKRDIARKQVANGID PVEERKAQKLAQKLSTKNSFESVSREWHAAKADRWTLAYREEIIKTFEQDVFPFIGKRPIAEIKPLELLEVLKRIEKRGA LEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFVRDLEAYTGSIITKNATKIVMLTGV RTQEMRFATWQELDLEKGLWEIPAERMKMRRPHIVPLSRQVIRLFQQLKPITGHYPYIFIGRNNRKKPISKESINQVIEL LGFKGRITGHGFRHTMSTILHEAGFNSAWIEMQLAHVDKNSIRGVYNHAQYLNGRSRMLQFYADKLYPN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-141 | 73 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-140 | 72 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 2e-140 | 72 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 3e-140 | 72 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 3e-140 | 72 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 9e-140 | 72 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 3e-141 | 72 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 2e-139 | 72 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 3e-139 | 72 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 3e-139 | 72 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 3e-109 | 58 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 7e-111 | 55 |
| intA | AAB00935.1 | integrase A | Not tested | vap locus | Protein | 7e-59 | 42 |
| int | AAN62223.1 | putative integrase | Not tested | PAGI-3(SG) | Protein | 7e-63 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO26_4941 | YP_003231837.1 | integrase | VFG0783 | Protein | 1e-140 | 72 |
| ECO26_4941 | YP_003231837.1 | integrase | VFG0598 | Protein | 1e-139 | 72 |
