Gene Information

Name : ECO26_3927 (ECO26_3927)
Accession : YP_003230858.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : peptidoglycan-binding like protein precursor
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 3882579 - 3882953 bp
Length : 375 bp
Strand : +
Note : -

DNA sequence : 
ATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAA
CAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAA
AACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATAT
AACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAA
GAGACAGCAATATGCCCCAAAATATACATTGTATATACCAGGCTTAATGAACTAG

Protein sequence : 
MFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILY
NHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKYTLYIPGLMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 1e-45 91
pilT AAC98888.1 PilT Virulence SPI-7 Protein 1e-23 51
pilT NP_458636.1 putative membrane protein Virulence SPI-7 Protein 2e-23 51
pilT NP_807847.1 hypothetical protein Virulence SPI-7 Protein 2e-23 51
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 9e-14 41
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 9e-14 41
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 5e-14 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 5e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_3927 YP_003230858.1 peptidoglycan-binding like protein precursor VFG0539 Protein 2e-14 41