Gene Information

Name : ECO26_3416 (ECO26_3416)
Accession : YP_003230357.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3328807 - 3329625 bp
Length : 819 bp
Strand : +
Note : Integrative element ECO26_IE04

DNA sequence :
ATGCGATTAGCAAGTCGTTTTGGTCATGTAAACCAGATACGCCGTGACCGCCCGCTGACACATGAAGAACTGATGCACTA
TGTGCCCAGTATTTTTGGGGAAGACCGGCATACCTCCCGCAGTGAACGCTATGCGTACATTCCCACCATCACCGTACTAG
AAAGCCTGCAGCGGGAGGGCTTTCAGCCCTTCTTCGCCTACCAGATCCGCGTGCGCGACCCGGGCCGCCGGGGATACACC
AAACACATGCTGCGTCTGCGCCGTGACGGGGAGATAAACGGACAACATGTCCCTGAAATCATCCTGCTGAACTCCCATGA
CGGTACTTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGGTGCGTCTGTGGCCAGTCTCTGG
GGGAAGTGCGTGTTCCACACCGGGGAAATGTGGTGGAGAAAGTTATCGAAGGGGCTTACGAGGTGGTGGGCGTGTTTGAC
CGGATAGAGGAGAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGTCACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACGCCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCCAGAGGAAAA
CGTATCCATACCCGTACCATTCACAGCATCGACACCGACATTAAGCTCAACCGGGCGTTGTGGGTGATGGCAGAAACACT
GCTGGAGAGCATGCGCTGA

Protein sequence :
MRLASRFGHVNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREGFQPFFAYQIRVRDPGRRGYT
KHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPSRQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
RIHTRTIHSIDTDIKLNRALWVMAETLLESMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-119 95
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-118 95
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-119 95
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-119 94
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-119 94
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-118 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 1e-117 94
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-119 94
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 4e-118 93
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 4e-118 93
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-114 92
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-118 92
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 7e-113 91
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-112 91
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 7e-113 91
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-75 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 7e-74 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_3416 YP_003230357.1 hypothetical protein VFG1676 Protein 6e-118 94
ECO26_3416 YP_003230357.1 hypothetical protein VFG0658 Protein 2e-118 93
ECO26_3416 YP_003230357.1 hypothetical protein VFG1526 Protein 2e-114 92
ECO26_3416 YP_003230357.1 hypothetical protein VFG1615 Protein 7e-113 91