Gene Information

Name : ECO26_3398 (ECO26_3398)
Accession : YP_003230340.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Unknown
Product : ISEc16 transposase OrfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3308491 - 3308790 bp
Length : 300 bp
Strand : -
Note : Integrative element ECO26_IE04

DNA sequence :
ATGACAAAACCAGTATCAATCAGCAAGAAGCCCCGTGAACAACATTCGCCTGAATTTCGTAACGAAGCCCTGAAACTCGC
TGAACGCATCGGTGTGGCCGCCGCAGCCCGTGAACTCAGCCTTTATGAATCTCAGCTTTATGCCTGGCGCAGTAAACAGC
AGCAACAAATGAGTTCGTCAGAGCGCGAAAGCGAACTGGCCGCTGAAAATGTCCGCCTTAAACGACAACTGGCGGAGCAG
GCTGAGGAACTGGCCATCCTCCAAAAGGCCGCGACATACTTCGCGAATCGCCTGAAATGA

Protein sequence :
MTKPVSISKKPREQHSPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSSERESELAAENVRLKRQLAEQ
AEELAILQKAATYFANRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 3e-28 96
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 3e-28 96
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 1e-27 96
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 1e-27 96
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 3e-27 82
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 2e-27 82
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 2e-27 82
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 2e-27 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_3398 YP_003230340.1 ISEc16 transposase OrfA VFG1632 Protein 6e-28 96
ECO26_3398 YP_003230340.1 ISEc16 transposase OrfA VFG0603 Protein 8e-29 96