|
Name : ECO26_2860 (ECO26_2860) Accession : YP_003229835.1 Strain : Escherichia coli 11368 Genome accession: NC_013361 Putative virulence/resistance : Virulence Product : cytoplasmic transmembrane protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2755895 - 2757175 bp Length : 1281 bp Strand : - Note : Integrative element ECO26_IE03 DNA sequence : ATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGTTGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGT GACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTGCGCGCTGCTGGCGGTTCGCTGGCGCTTG CCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCTGAAGTTTATTTGGGCGCCGTGGATCGAGCGCTGGCGGCTTCCG CCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGACTATTGCCGC AGCGATTGGCTGGTTTAGGCGAGAAGGGGGATTCCCCGATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAG GCACGGTCGCCTCCACCATTGATATCGCCAGCGACGGCTTTTGTGTCGATCAACTGACCCGCACGGGTTACGGCTGGGGA AACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGATGTGCGGCGGCGGGGTGTTCATGATGCTGTCGGCGGCATCCGG CTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATTATGGCGCTGTCACTCCCGCTGTGGCGCATTACGGAGCCGACGC GAACAGCGACTATCCTGCATGTTCCGGCGTTAGGTTATGCGCTAAGGAGGAAGCAGGCGCGCCTGGGCTTACTGCTGGTA TTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTCTTCTGGCACCGCTGTTGTTGGATCATGGGTTGAGCATGTCCAC ATTGGGCGCGTTGTTCAGCGGCGGCAATATTGCAGCGGGCATAGCAGGAACGCTGGCTGGCGGATTGCTGATGAAATACA CCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGTCCAGGGGATCGCGCTGCTGGCGGTGGTGATGACGCTCATGATG GCGCCGGGTCATCTGCTGCTGCAGATTCTCCAGTGTCTGGTCATTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTG TCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTGCAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGATGCGG CAATCGCCATTCTGGCAGGCGTTATCGGTGGCGTTGTTGCTCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGG GCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTG A Protein sequence : MSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLP PGSQERRSRMLILRGQVALAAILTIAAAIGWFRREGGFPDTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWG NSVQVGGSYLGMMCGGGVFMMLSAASGWPVAMLMMAVLIMALSLPLWRITEPTRTATILHVPALGYALRRKQARLGLLLV LMLNSGMRFVLPLLAPLLLDHGLSMSTLGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMM APGHLLLQILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAG AFTLLAAWVAYIRLHSARELMTSAID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp8 | YP_002346906.1 | signal transducer | Not tested | HPI | Protein | 2e-119 | 99 |
| ybtX | YP_070128.1 | MFS superfamily transporter signal transducer | Virulence | HPI | Protein | 2e-119 | 99 |
| ybtX | YP_853071.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 4e-119 | 99 |
| ybtX | CAA21386.1 | - | Virulence | HPI | Protein | 1e-118 | 99 |
| ybtX | NP_669702.1 | hypothetical protein | Virulence | HPI | Protein | 6e-119 | 99 |
| ybtX | NP_993011.1 | signal transducer | Virulence | HPI | Protein | 6e-119 | 99 |
| irp8 | YP_001006811.1 | putative signal transducer | Not tested | HPI | Protein | 2e-117 | 98 |
| irp8 | CAB46571.1 | signal transducer, Irp8 | Virulence | HPI | Protein | 1e-116 | 97 |
