Gene Information

Name : ECO26_1788 (ECO26_1788)
Accession : YP_003228824.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Virulence
Product : porcine attaching-effacing associated protein Paa/adherence factor AdfO
Function : -
COG functional category : R : General function prediction only
COG ID : COG4588
EC number : -
Position : 1750863 - 1751609 bp
Length : 747 bp
Strand : +
Note : Prophage ECO26_P08

DNA sequence : 
ATGGCAGGTTTTTTAATATTCCTGTCTTCTGCTGCTTATGCTGATATCAATCTGTATGGTCCTGGTGGCCCGCATACAGC
CTTGCTTGATGCAGCCAAACTTTATGCCGAAAAAACAGGTATTATAGTGAACGTTCATTACGGCCCACAGAACAAATGGA
ATGAAGATGCCAAAAAAAATGCAGATATCTTGTTTGGCGCATCAGAACAATCTGCTCTGGCTATCATTCGGGACCATAAA
GACAGCTTCAGTGAAAAAGATATTCAGCCTCTTTATCTGCGAAAAAGTATTTTACTGGTAAAGAAAGGTAATCCTAAAAA
TATCCGGAGTATTGACGACCTGACCAGACCTGGGATTGGCGTAATTGTTAATGATGGTGGTGGTACCAGTAATACATCAG
GCACTGGCGTCTGGGAAGATATTGCCGGACGTAAAGGGAATATAGAAACTGTCGCCGCAATCCGAAAAAATATTATTTTA
TATGCGCCCAATAGCGGAACTGCACGTAAGGCTCTTGAGAATCAGCCTGGAGCAGATGTCTGGATAACCTGGGCTGACTG
GGCAGCCAGTAATCCAGAAATTGGTGATGTCGTGGAAATAGCGCCAGACTACGTGATATGGCGTGATATGAACATTACAG
TACGTCAGGATGCAAATGATGAAACCCGTCGATTTGCAGAATGGCTACAAACCGATGAAGCGGCGCCTGCATTCAAAAAA
TATGGCTGGACCAGGAAAGGCACTTGA

Protein sequence : 
MAGFLIFLSSAAYADINLYGPGGPHTALLDAAKLYAEKTGIIVNVHYGPQNKWNEDAKKNADILFGASEQSALAIIRDHK
DSFSEKDIQPLYLRKSILLVKKGNPKNIRSIDDLTRPGIGVIVNDGGGTSNTSGTGVWEDIAGRKGNIETVAAIRKNIIL
YAPNSGTARKALENQPGADVWITWADWAASNPEIGDVVEIAPDYVIWRDMNITVRQDANDETRRFAEWLQTDEAAPAFKK
YGWTRKGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 3e-55 51
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 3e-55 51
acfC AAA82706.1 AcfC Virulence VPI Protein 3e-55 51
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 4e-55 51
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 4e-55 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_1788 YP_003228824.1 porcine attaching-effacing associated protein Paa/adherence factor AdfO VFG0839 Protein 3e-105 100
ECO26_1788 YP_003228824.1 porcine attaching-effacing associated protein Paa/adherence factor AdfO VFG0105 Protein 2e-55 51