Gene Information

Name : ECO26_1342 (ECO26_1342)
Accession : YP_003228384.1
Strain : Escherichia coli 11368
Genome accession: NC_013361
Putative virulence/resistance : Unknown
Product : IS629 transposase OrfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1360487 - 1361377 bp
Length : 891 bp
Strand : -
Note : Integrative element ECO26_IE02

DNA sequence :
ATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCAGACCGGTATGCAGCGAACTGCATATTGCCCCGTCAAC
GTATTACCATTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCACGATGACTGGCTGAAGAAAG
AGATACAGCGCGTATACGATGAAAATCACCAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATC
AGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCAGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTAC
GACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGG
TGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATT
GTGGGGTGGCGGGTCTCATCGTCCATGGAGACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACC
GTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGAT
TACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAG
GTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCG
ACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATC
TGGCAGCCTGA

Protein sequence :
MMPLLDKLREQYGVRPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKKEIQRVYDENHQVYGVRKVWRQLLREGI
RVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYI
VGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAE
VIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 3e-135 99
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-134 99
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 3e-135 99
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 3e-93 99
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-134 99
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 1e-93 99
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 6e-109 99
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-134 98
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-99 98
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 5e-130 97
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-130 97
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-130 97
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-130 97
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 6e-133 96
Z1198 NP_286733.1 transposase Not tested TAI Protein 5e-130 96
Z1638 NP_287141.1 transposase Not tested TAI Protein 5e-130 96
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-128 96
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 3e-130 96
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-130 96
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 9e-133 96
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 7e-131 95
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 5e-52 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO26_1342 YP_003228384.1 IS629 transposase OrfB VFG1602 Protein 4e-131 95