Gene Information

Name : Za10_1863 (Za10_1863)
Accession : YP_003226975.1
Strain :
Genome accession: NC_013356
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 42407 - 43696 bp
Length : 1290 bp
Strand : +
Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: spq:SPAB_05420 hypothetical protein

DNA sequence :
ATGTTACTGGCAGGCGCTATTTTTGTCCTGACCATCGTTTTGGTTATCTGGCAACCGAAGGGATTAGGGATCGGCTGGAG
TGCGACGCTGGGCGCGGTACTGGCGCTGATCTCTGGCGTAGTCCATTTTGGTGATATCCCTGTAGTGTGGAATATTGTCT
GGAATGCGACGGCGACCTTTATTGCCGTGATTATTATCAGCCTTCTGCTCGATGAATCGGGCTTTTTCGAATGGGCGGCG
CTGCACGTTTCACGTTGGGGTAACGGTCGCGGGCGTTTGCTGTTTACCTATATCGTTTTGCTCGGCGCAGCGGTGGCGGC
ACTGTTTGCCAACGATGGTGCGGCATTGATTCTGACGCCAATTGTTATCGCCATGCTGCTTGCATTAGGTTTCAGCAAAG
GCACTACGCTGGCATTTGTCATGGCCGCCGGGTTTATTGCCGATACGGCCAGTCTGCCGCTTATCGTGTCCAACCTGGTT
AACATCGTTTCTGCAGACTTCTTTGGGCTGGGTTTCACTGAGTATGCGTCGGTAATGGTGCCGGTGGATATCGCAGCCAT
TATCGCCACGCTGGTGATGCTGCATCTGTTCTTCCGCAAAGATATTCCGCCAACTTACGACCTGGCTCTCCTGAAAGCAC
CGGCAAAAGCGATTAAAGATCTGGCAACCTTCAGAACCGGCTGGATAGTGTTGATCCTTCTTCTGGTTGGCTTTTTCGTC
CTTGAGCCGTTGGGTATCCCGGTCAGTGCGATTGCTGCTGTAGGGGCTGTCATTCTGTTTGCGGTGGCGAAGCGAGGCCA
TGCCATTAACACTGGCAAAGTGCTTCGCGGTGCGCCATGGCAGATCGTCATATTCTCTCTGGGAATGTATCTGGTGGTCT
ATGGTCTGCGTAATGCCGGACTAACAGAATACCTCTCCGGTGTGTTGAACGTGCTGGCAGATAAAGGACTTTGGGCCGCG
ACGTTTGGTACTGGCTTCCTGACGGCTTTCCTCTCTTCCATCATGAACAATATGCCTACCGTGCTGGTTGGTGCTCTCTC
TATTGATGGCAGCACTGCAACAGGCGTTATCAAAGAGGCGATGATTTTTGCCAACGTGATTGGCTGCGATCTTGGACCGA
AAATTACACCTATTGGTAGCCTGGCAACGTTGCTCTGGCTGCATGTCCTTTCACAGAAGAACATGACCATCACATGGGGA
TACTATTTCCGCACCGGGATCGTCATGACTCTGCCTGTGCTGTTTGTAACGCTGGCCGCGCTGGCGCTACGTCTCTCTTT
CACTTTGTAA

Protein sequence :
MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALISGVVHFGDIPVVWNIVWNATATFIAVIIISLLLDESGFFEWAA
LHVSRWGNGRGRLLFTYIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFGLGFTEYASVMVPVDIAAIIATLVMLHLFFRKDIPPTYDLALLKAPAKAIKDLATFRTGWIVLILLLVGFFV
LEPLGIPVSAIAAVGAVILFAVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADKGLWAA
TFGTGFLTAFLSSIMNNMPTVLVGALSIDGSTATGVIKEAMIFANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTITWG
YYFRTGIVMTLPVLFVTLAALALRLSFTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-160 96
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-95 60
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-94 59
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-98 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Za10_1863 YP_003226975.1 arsenical pump membrane protein BAC0578 Protein 3e-163 99
Za10_1863 YP_003226975.1 arsenical pump membrane protein BAC0576 Protein 2e-165 99
Za10_1863 YP_003226975.1 arsenical pump membrane protein BAC0031 Protein 2e-159 94
Za10_1863 YP_003226975.1 arsenical pump membrane protein BAC0577 Protein 2e-153 91
Za10_1863 YP_003226975.1 arsenical pump membrane protein BAC0574 Protein 1e-95 60
Za10_1863 YP_003226975.1 arsenical pump membrane protein BAC0575 Protein 9e-99 59