Gene Information

Name : Za10_1572 (Za10_1572)
Accession : YP_003226694.1
Strain : Zymomonas mobilis NCIMB 11163
Genome accession: NC_013355
Putative virulence/resistance : Resistance
Product : helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1811711 - 1813789 bp
Length : 2079 bp
Strand : +
Note : PFAM: helicase; DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: helicase; DEAD-like helicase; KEGG: mno:Mnod_7183 DEAD/DEAH box helicase

DNA sequence :
ATGCGCCCAGATATTCTTAATCCGCTGTTTGCCGAAACAGAATCCTTGAAAGGGGTTGGTTCGGCCTTACTCAAACCTTT
AAAAAAGCGTCAGCTGACGCGCCTCAAGGATTTGCTTTTTTATCTGCCCAGTGGACAGATGCGGCGCGTTAAATCAGATC
ATATCAATGCCAAAGACGTCGGTGCCACGGTTATTCTGACCCTGACAGCCAAAGAGTATCGCCATCCTTCCGGTCGCGGG
CCTTTCCGTATTTTAGCCGAAGACCCCTTTGGTGGTCAGATTCAGCTTTTATGGTTTGGTAATCACAGCAGTTGGGCAAG
AAAACTGATGCCCATCGGAGAAACCCGTTTAGTCTCTGGCAAGCTCGATATCTATCAAGAGCAATTACAAATTGTCCACC
CTTCGGAAATCGTGCCGTTAAGCGAAGAAAACAGCATCCCGCTCGAAGAAACCCTTTATCCTCTATCGGATGGCCTGACG
CATCGTCGTATTGGGCAGCTTATCCGGCAAGCATGGGAAAAATCACCGGATTTACCCGAATGGATTGAACCAAGCCTACT
CAAGAAACATCAATGGCCTTCATGGCGAGAGGCAGTTGAAAGGATACATCAGCATCCCGATGATCGGGCGGCTAAATTAA
GAATTGGCTATGACGAAATTTTTGCCAATCAGTTGGCTTTAAAACTTATTCGTGCGGCTAACCGGCGGAAACGGGGCTTC
CCGTTAAAGGGGGATGGTCATTTACGGGATGCGCTGAATTTACCTTTTCAGCCAACGGGCGCACAAAGACGTTCCCTTGC
CGAAATCGAAGGCGATATGCAGCAAGCCTCTCCGATGCTGCGATTGTTACAAGGCGATGTCGGCTCGGGTAAAACATGGG
TCGCTTTACATAGCCTGCTGATCGCCGCCGAAGCGGGGTATCAGGGGGCATTACTTGCCCCGACGGAAATTCTTGCCCGT
CAGCATTTTGAGACCCTAAGTCAACAGCTTGCCGGATTGCCGGTGAATATCGCCCTTTTGACGGGGCGAGATAAAGGCAA
ATTGCGAGAATCCACCTTAATGGGATTGGCAGACGGCTCTATTCATCTTCTGGTTGGTACCCATGCCATTTTTCAGGAAA
AGGTTAGCTACAAAAATCTGGGTCTCGCTATTATTGATGAACAGCATCGCTTCGGGGTCGCCCAACGGATGATGCTGGCT
GAAAAGGCCATTCATACCCCGCATTTATTGGTTATGACAGCAACGCCTATTCCACGCAGCCTGATGCTGACGGCGCATGG
TGAAATGGATGTTAGCCGCCTTGATGAAATGCCCCCTGGTCGTCAGCCGGTCGAAACAAGGGTGATTTCCAGCCGGAAAA
TTCCTGAAATAATCGCCTCTCTTGGCCGCCATATCGCCGAAGGGGGACAATCCTATTGGGTCTGTCCGGCCGTCGGTGAA
GCCGATATTGAAGAAGATTTTTCTCCAAATGCAATCGCGGCGGCTGAACAACGCTTTTCTTTGCTTCAACAGCATTTCGG
GAAAAAAGTCGGGCTAGTGCATGGCAAGATGAAACCCGCTGAAAAAGACAAGGTTATGGATGACTTTGCTGCGGGTAAAA
TTGCGGTTCTGGTCGCGACAACCGTGATTGAAGTCGGGGTTAATGTCCCCAATGCGACCTTGATGATTATCGATCAGGCC
GAACGTTTCGGCTTGGCACAGCTCCATCAATTAAGGGGGCGCGTGGGGCGTGGCGGCGGTCGTTCAATTTGTCTGCTTTT
ACGGAGCGAAGAACTCACTTCGGTGGCAAGGGAACGTTTGGCTCTTATCCGTGAATGTAACGATGGTTTTCGGCTGGCCG
AAGAAGATTTACGATTGCGGGGCAGTGGTGAAATCTTGGGAACCAAGCAATCAGGTGAATCTCATTTCCAGATTGCTTCT
CCTGAAGACCTCTCTGAATTGCTGCCAATAGCGAATGATGATGCCCGATTATTGGTTGATCGTGACGGCGGATTGTCGGG
TGAAAGGGGGCAGGCTGCGCGAATAGCCCTCTATCTTTTTGAACGCGATGCTGGTGTCAGTTTCCTGCGGTCGGGCTGA

Protein sequence :
MRPDILNPLFAETESLKGVGSALLKPLKKRQLTRLKDLLFYLPSGQMRRVKSDHINAKDVGATVILTLTAKEYRHPSGRG
PFRILAEDPFGGQIQLLWFGNHSSWARKLMPIGETRLVSGKLDIYQEQLQIVHPSEIVPLSEENSIPLEETLYPLSDGLT
HRRIGQLIRQAWEKSPDLPEWIEPSLLKKHQWPSWREAVERIHQHPDDRAAKLRIGYDEIFANQLALKLIRAANRRKRGF
PLKGDGHLRDALNLPFQPTGAQRRSLAEIEGDMQQASPMLRLLQGDVGSGKTWVALHSLLIAAEAGYQGALLAPTEILAR
QHFETLSQQLAGLPVNIALLTGRDKGKLRESTLMGLADGSIHLLVGTHAIFQEKVSYKNLGLAIIDEQHRFGVAQRMMLA
EKAIHTPHLLVMTATPIPRSLMLTAHGEMDVSRLDEMPPGRQPVETRVISSRKIPEIIASLGRHIAEGGQSYWVCPAVGE
ADIEEDFSPNAIAAAEQRFSLLQQHFGKKVGLVHGKMKPAEKDKVMDDFAAGKIAVLVATTVIEVGVNVPNATLMIIDQA
ERFGLAQLHQLRGRVGRGGGRSICLLLRSEELTSVARERLALIRECNDGFRLAEEDLRLRGSGEILGTKQSGESHFQIAS
PEDLSELLPIANDDARLLVDRDGGLSGERGQAARIALYLFERDAGVSFLRSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-136 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Za10_1572 YP_003226694.1 helicase BAC0356 Protein 1e-100 42