|
Name : ECO103_p05 (ECO103_p05) Accession : YP_003225076.1 Strain : Genome accession: NC_013354 Putative virulence/resistance : Virulence Product : type II secretion protein EtpF Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 7092 - 8315 bp Length : 1224 bp Strand : + Note : - DNA sequence : ATGGCGTTGTTTCATTATCAGGCATCGGATATTCACGGTAGAAAACGCCGTGGCGTTCTGGAGGCGGATTCAGCTCGACA TGCCCGCCAGTTGCTGCGTGAGCAGGCGCTTATTCCAGTTAGGCTGGAAGAGAAACAGCTCCATCACCAGCACTCACCGC GGAGTATCCTTCGATTTCGTCCTCGTGGGGTGAGCAGCGCCGAGCTTGCATTATTGACACGGCAGTTATCCACCTTGGTG GCCGCATCACTGCCGCTTGAAGAGGCGCTGGACGCGCTGTCGAGGCAGAGTGAGAAACCTCGCCAGCGGGATTTAATCGC TGCCGTGCGCGCTAGGGTCCTTGAGGGACATTCCTTGGCCACGGCGATGGGAATGTTTCCTGGTACGTTTGAGCGTCTTT ATTGTGCGATGGTGGCGGCGGGTGAAACATCCGGTCGCTTGGATGTGGTACTTAGTCGTCTGGCTGACTATACCGAGCAA CGCCAGATCATGCGAAACCGTCTGCTCCAGGCACTGATCTATCCCTGTGTCCTGACGTTGGTAGCGGTAGGGGTGATTGC CATTCTGCTTACTGCTGTTGTGCCGAAAGTGGTTGAGCAGTTTATTCATATGAAACAGACCCTTCCTCTGTCTACCCGCG TACTGATGGGGCTGACTGAGGTCTGCCAGACTTGGGGCCCGTGGCTGCTGCTAGCCGCAGCCACGGGCTGGATAGCGGGG CGTATGATGTTACACAAGCCCTCCCGGCGTCTGGCTTTTCATCATCTGCTGCTGCGCCTGCCGATCGTGGGGCGTATATC GCGTGGGCTGAATACCGCACGTTATGCCCGCACGCTGAGCATCCTTAATGCCAGTGCGGTGCCGCTACTCCAGGCTATGT ACATCAGTGGAGACGTGTTGAGTAATGACTGGGCCCGTCATCAGTTAGCCACCGCAGCCGAATTGGTTCGGGAAGGGGTC AGCCTGCATCAGGCGCTGGAGCAGACCTCGCTATTTCCGTCCATGATGCGGCACATGATTGCCAGCGGTGAAAATAGTGG CGAACTCGACAGCATGCTGGAACGGGCCGCCGATAATCAGGATCGTGAATTCAGCGCACAGATGCAGCTGGCGCTGGGAT TGTTTGAACCAATGTTGGTGGTGGGGATGGCTGGCGTCGTCTTGTTTATTGTTCTGGCAATTCTGCAACCGCTCCTGCAA CTCAACAATATGATGAATATTTGA Protein sequence : MALFHYQASDIHGRKRRGVLEADSARHARQLLREQALIPVRLEEKQLHHQHSPRSILRFRPRGVSSAELALLTRQLSTLV AASLPLEEALDALSRQSEKPRQRDLIAAVRARVLEGHSLATAMGMFPGTFERLYCAMVAAGETSGRLDVVLSRLADYTEQ RQIMRNRLLQALIYPCVLTLVAVGVIAILLTAVVPKVVEQFIHMKQTLPLSTRVLMGLTEVCQTWGPWLLLAAATGWIAG RMMLHKPSRRLAFHHLLLRLPIVGRISRGLNTARYARTLSILNASAVPLLQAMYISGDVLSNDWARHQLATAAELVREGV SLHQALEQTSLFPSMMRHMIASGENSGELDSMLERAADNQDREFSAQMQLALGLFEPMLVVGMAGVVLFIVLAILQPLLQ LNNMMNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-86 | 55 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-85 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO103_p05 | YP_003225076.1 | type II secretion protein EtpF | VFG2049 | Protein | 2e-85 | 54 |
| ECO103_p05 | YP_003225076.1 | type II secretion protein EtpF | VFG0181 | Protein | 5e-80 | 51 |
| ECO103_p05 | YP_003225076.1 | type II secretion protein EtpF | VFG1870 | Protein | 2e-72 | 44 |
