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Name : ECO103_p04 (ECO103_p04) Accession : YP_003225075.1 Strain : Genome accession: NC_013354 Putative virulence/resistance : Virulence Product : type II secretion protein EtpE Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 5588 - 7090 bp Length : 1503 bp Strand : + Note : - DNA sequence : ATGAGCAGTATACAGAACGTCAGTGAATCACGCCCCCTTCTCCCTTTTTCCTTTTCCCGTACACAGCGAATTTTGTTGCT GCGTGAACAGGAAGGGAACCAAGTGTTTTGCATGGAGGATACACCTGCCAGTGCCCTGCTAGAGGTTCGCAGGGTAGCTG AAGGTCCTCTGAATGTCACAACTCTGTCGGCTGAGGCATTTGAAAAACAGCTGGTGAGCTGCTATCAGCGTGATTCTGAT GAAGCGCGACAAATGATGGCTGATATTGGTAATGAAATGGATTTTTATACCGTCGCGGGGGAGTTGCCTGACAGTGAGGA CTTACTGGATGCGAATGACGATGCGCCTATTATCCGCCTGATTAACGCCATGCTGACTGAGGCAATTAAAGAGAAAGCCT CAGATATTCATATTGAAACGTACGAACGCCATCTACAGGTTCGCTTTCGCGTTGATGGCGTTCTCCGGGAGATCCTCCGT TTACGCCGGAATCTGGCTTCGTTACTGATTTCACGCATTAAAGTTATGGCTCGGCTGGATATTGCCGAAAAACGCGTTCC CCAAGATGGTCGCATGGTGCTGCGTATAGGCGGACGGGCTGTGGATGTGCGTGTTTCAACGTTGCCTTCGAACCATGGTG AACGCATCGTGCTGCGTTTACTAGACAAAAACAGCGTTAGTCTCGATCTGGCTGCACTCGGCATGTCGCCGCAGAATCAG AGACACATTGATGCGCTGATCCGCCGTCCTCACGGCATTATTTTGGTGACTGGGCCAACTGGGTCGGGGAAAAGCACGAC GCTTTATGCTGCGTTAAGCCGGCTGAATCCACAGGACCGCAACATCATGACAGTAGAGGATCCTGTTGAATATGAACTGG ACGGTATCAGTCAGACCCAGGTCAACCCGAAGGTGGACATGACTTTTGCCAGGAGCCTGCGTGCTATTTTACGTCAGGAT CCAGATGTGGTGCTTGTAGGGGAGATCCGTGACAGTGAAACAGCCCAGATTGCTGTACAGGCCTCACTGACTGGGCATCT GGTGCTGTCAACGTTACATACGAACAGCGCTGCAGGCGCGTTATCGCGCCTGCAGGATATGGGCATCCCCCCCTTTCTGC TTTCCACCTCATTGTTGGCTGTTCTAGCCCAACGACTAGTTCGCACGCTGTGTCCGCGCTGTCGTCAGTCCTGTCAGGCC AGTGCTGAGCTGGCGAAGGACATGGATATTCCCCCGGAAACCACGATTTGGCAGCCTGCCGGGTGTCAGCACTGCAGTTT TACTGGCTATCACGGGCGTACCGGGCTCCACGAACTGTTGCTGATTGACGATCGCATCCGGATGGCAATATATCAGGGGG AAGGAGAGCTGAGTATTACCCGCTTGGCTGGGGGGCGCTATCTGACGCTGCGTGGCGACGGGCGACAAAAGGTGCTAGCC GGTGAGACCAGTTGGGAGGAGGTGGTTCGCGTTACTGAAAGCAGGTTGCAGGAAGAGGAATGA Protein sequence : MSSIQNVSESRPLLPFSFSRTQRILLLREQEGNQVFCMEDTPASALLEVRRVAEGPLNVTTLSAEAFEKQLVSCYQRDSD EARQMMADIGNEMDFYTVAGELPDSEDLLDANDDAPIIRLINAMLTEAIKEKASDIHIETYERHLQVRFRVDGVLREILR LRRNLASLLISRIKVMARLDIAEKRVPQDGRMVLRIGGRAVDVRVSTLPSNHGERIVLRLLDKNSVSLDLAALGMSPQNQ RHIDALIRRPHGIILVTGPTGSGKSTTLYAALSRLNPQDRNIMTVEDPVEYELDGISQTQVNPKVDMTFARSLRAILRQD PDVVLVGEIRDSETAQIAVQASLTGHLVLSTLHTNSAAGALSRLQDMGIPPFLLSTSLLAVLAQRLVRTLCPRCRQSCQA SAELAKDMDIPPETTIWQPAGCQHCSFTGYHGRTGLHELLLIDDRIRMAIYQGEGELSITRLAGGRYLTLRGDGRQKVLA GETSWEEVVRVTESRLQEEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-133 | 60 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-133 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO103_p04 | YP_003225075.1 | type II secretion protein EtpE | VFG2048 | Protein | 2e-133 | 59 |
| ECO103_p04 | YP_003225075.1 | type II secretion protein EtpE | VFG0182 | Protein | 1e-132 | 59 |
| ECO103_p04 | YP_003225075.1 | type II secretion protein EtpE | VFG1876 | Protein | 1e-123 | 53 |
| ECO103_p04 | YP_003225075.1 | type II secretion protein EtpE | VFG2426 | Protein | 3e-75 | 48 |
| ECO103_p04 | YP_003225075.1 | type II secretion protein EtpE | VFG0112 | Protein | 2e-80 | 46 |
| ECO103_p04 | YP_003225075.1 | type II secretion protein EtpE | VFG0233 | Protein | 2e-80 | 46 |
