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Name : ECO103_p03 (ECO103_p03) Accession : YP_003225074.1 Strain : Genome accession: NC_013354 Putative virulence/resistance : Virulence Product : type II secretion protein EtpD Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3621 - 5591 bp Length : 1971 bp Strand : + Note : - DNA sequence : TTGTTCAGGAAATGGTTGAACGGGCGCTTGTCGATATTTGTATTCACGACAGTATTTCTGAGTGCCATTCCGGGATGGGG GGCTGAATTTTCGGCCAGCTTTAAAGATACGGATATTCAGGAGTTCATTAATACTGTCAGCAAAAATCTGCACAAAACGG TAATAATTAATCCTGATGTGCAGGGGACCATCACTGTACGCAGCTACGATATGCTGAACGAGGAACAATATTATCAGTTC TTTCTCAGCGTGCTGGATGTTTATGGTTTTGCCGTGGTCGATATGCACAACGGTATACTGAAAGTGGTGCGTTCAAAAGA TGCTAAAACGTCGGCGGTGCCGGTAGCTAGTGATGCCAGCCCTGGGACTGGTGATGAGGTTGTTACCCGGGTGGTCCCCG TCAGTAACGTGGCAGCCAGAGACTTGGCGCCCTTGCTGCGTCAGCTCAATGATAATGCTGGCGCAGGAAGCGTAGTGCAT TATGAACCCTCTAACGTTCTGCTGATGACTGGTCGTGCTGCCGTGGTGAAACGGCTGATGGAGATTGTTGAACGGGTGGA TAAGGAGGGCAATCGCAGCGTTGCCACGGTCCCACTTACCTACGCCTCTGCAACGGATGTAGCCAGACTTGTCACGGAAC TGACTAAAGAAAGTGATAAGACAGCCATGCCAGCCTGGATGACAGCGAAGCTGGTTGCTGACGAGCGGACAAACTCAGTT CTCGTCAGCGGAGAGCCAATCTCCCAACAGCGTATCATCTCCATGATTAAGCAACTGGACCGTAAGGAGGATGTTCAGGG TAATACGAAGGTGATTTACCTGAAATATGCGAAGGCGAAGGATTTAGTGGAAGTCCTGACGGGCATCAGCAGCAATATTG AAAACGACGCTAAAAAGAGCTCGTCAACGGAAGCTCTGCGAAAAGGGGTGACGATTAAATCCCACGAACAAACCAATGCC TTGATCCTGACAGGGGCTCCTGACGTCATCCGCGACTTGGAAAATGTAATTTCGCAGTTGGATATTCGTCGTCCTCAGGT CCTGGTGGAAGCCATCATTGCTGAAGTACAGGATGCTGACGGGTTGAATCTGGGGATTCAGTGGGTGAATAAACACTCCG GTGTGACGCAGTTCACCAGTACTGGTTTACCCATTACCACGATGGTTCAGACCCGTCAGAGCGATATTTCTGACAGCGAT CAGAGCAATACCTTGAGCATGTTTAACGGGATTGCAGCAGGGTTTTATCAGGGAAACTGGGCGATGCTGCTGACGGCGCT CTCCACAAGTAGCAAAAATGATATCTTGGCAACCCCCAGTATTGTTACGCTGGACAATATGGAGGCCACGTTCAATGTTG GTCAGGAAGTTCCGGTGCTTTCGGGTTCACAGACCACCTCTGGGGACAATATTTTTAACACCGTCGAGCGTAAAACGGTG GGGATCAAACTCAGGGTAAAACCCCAGATCAACGAGGGTGATTCAGTGTTACTGGAGATAGAGCAGGAGGTGTCCGGTGT GGCAGATACAGCAGTAGCTACCACTACTGACTTGGGGGCAACCTTCAATACCCGGACAGTGACCAATGCTATGCTGGTAG GGAATGGCGAAACGGTGGTGGTCGGCGGATTACTGGATAAGTCGATCAGAGGGAGTGAGAGTAAAGTACCTCTGCTGGGG GATATCCCAGTACTGGGACATCTTTTTAGCTCAAAAAGTGAACATGCAGCCAAGCGTAATCTGATGTTGTTCATTCGGCC AACAATTATTCGTGAACGCGACGGATTTCGTCATGCTTCGGCCGAAAAATACCTGTCGTTTAATCAGGAGCAGGTGCAGT CGCGTGGTAAAGAAACAATGGCGCTGACGCTGAATGAGGAACAGCTCAAGCTATCCCGAGATCGGGACGATACGACTTTT CGGAAAGTGAAAACGGCGATTGCTGCGTTTTATGCGCGGGGGATGCAATGA Protein sequence : MFRKWLNGRLSIFVFTTVFLSAIPGWGAEFSASFKDTDIQEFINTVSKNLHKTVIINPDVQGTITVRSYDMLNEEQYYQF FLSVLDVYGFAVVDMHNGILKVVRSKDAKTSAVPVASDASPGTGDEVVTRVVPVSNVAARDLAPLLRQLNDNAGAGSVVH YEPSNVLLMTGRAAVVKRLMEIVERVDKEGNRSVATVPLTYASATDVARLVTELTKESDKTAMPAWMTAKLVADERTNSV LVSGEPISQQRIISMIKQLDRKEDVQGNTKVIYLKYAKAKDLVEVLTGISSNIENDAKKSSSTEALRKGVTIKSHEQTNA LILTGAPDVIRDLENVISQLDIRRPQVLVEAIIAEVQDADGLNLGIQWVNKHSGVTQFTSTGLPITTMVQTRQSDISDSD QSNTLSMFNGIAAGFYQGNWAMLLTALSTSSKNDILATPSIVTLDNMEATFNVGQEVPVLSGSQTTSGDNIFNTVERKTV GIKLRVKPQINEGDSVLLEIEQEVSGVADTAVATTTDLGATFNTRTVTNAMLVGNGETVVVGGLLDKSIRGSESKVPLLG DIPVLGHLFSSKSEHAAKRNLMLFIRPTIIRERDGFRHASAEKYLSFNQEQVQSRGKETMALTLNEEQLKLSRDRDDTTF RKVKTAIAAFYARGMQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-119 | 45 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 2e-128 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO103_p03 | YP_003225074.1 | type II secretion protein EtpD | VFG2047 | Protein | 2e-116 | 45 |
