Gene Information

Name : fepD (ECO103_0598)
Accession : YP_003220596.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : ferric enterobactin (enterochelin) transport FepD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 658977 - 659981 bp
Length : 1005 bp
Strand : -
Note : membrane component of ABC superfamily

DNA sequence :
ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAG
TCTGCTCATTGGGGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCCTTCTCCGGCACCTGCCAGAGCGCCGACTGCA
CCATCGTGCTCGACGCGCGTCTGCCGCGTACCCTTGCCGGTTTACTGGCAGGCGGCGCGCTTGGCCTTGCCGGGGCGTTA
ATGCAAACCCTCACCCGTAACCCACTTGCCGACCCCGGCTTGCTTGGCGTGAACGCCGGAGCCAGCTTTGCCATTGTGCT
GGGTGCGGCGCTGTTTGGTTACTCTTCCGCACAGGAACAACTGGCGATGGCCTTCGCCGGGGCGCTGGTGGCCTCGTTGA
TTGTTGCCTTTACCGGCAGCCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTGGCGCTGGCGGCG
GTGCTGGAAGGACTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAACTGCGTTTCTGGCAAGCCGGTTC
GCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCGGTGCTGATCGCCGGAGCAACTGCGCTATTACTGA
GTCGCGCGCTGAACAGTTTGAGCCTCGGCAGCGACACCGCGACGGCGCTGGGCAGTCGCGTGGCGCGCACACAGTTGATT
GGTCTGCTGGCGATTACCGTGCTTTGTGGTAGTGCGACGGCAGTAGTTGGCCCGATTGCCTTTATTGGCCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTTGCTACCCCTGCCCTGCTGC
TGTTTGCCGATATCATCGGGCGGGTGATTGTGCCCGGCGAACTGCGCGTTTCTGTGGTCAGTGCGTTTATTGGTGCACCG
GTGCTGATCTTCCTCGTGCGACGTAAAACGCGAGGTGGTGCATGA

Protein sequence :
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLI
GLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAP
VLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 9e-28 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 9e-28 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 9e-28 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 9e-28 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_003220596.1 ferric enterobactin (enterochelin) transport FepD VFG0926 Protein 3e-103 99