Gene Information

Name : hpaF (ECO103_5133)
Accession : YP_003224946.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate isomerase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3232
EC number : -
Position : 5340040 - 5340420 bp
Length : 381 bp
Strand : -
Note : -

DNA sequence :
ATGCCGCACTTTATCGTTGAATGCAGTGACAACATCCGCGAAGAAGCCGACCTGCCGGGGTTGTTCGCCAAAGTGAATCC
GACGCTGGCAGCCACGGGTATTTTTCCGCTGGCGGGTATTCGCAGCCGCGTGCATTGGGTCGATACCTGGCAGATGGCCG
ACGGGCAGCGTGATTATGCCTTCGTGCATATGACGTTGAAAATCGGCGCAGGTCGCAGCCTGGAAAGCCGTCAGCAGGCG
GGTGAAATGCTGTTTGAACTGATTAAAACGCACTTCGCCGCCCTGATGGAGAGCCGCCTGCTGGCGTTGTCGTTTGAGAT
TGAAGAGCTGCATCCGACGCTGAATTTTAAACAAAACAACGTGCACGCATTGTTTAAGTAG

Protein sequence :
MPHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRVHWVDTWQMADGQRDYAFVHMTLKIGAGRSLESRQQA
GEMLFELIKTHFAALMESRLLALSFEIEELHPTLNFKQNNVHALFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 1e-45 77