Gene Information

Name : ECO103_5087 (ECO103_5087)
Accession : YP_003224900.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5289561 - 5289926 bp
Length : 366 bp
Strand : +
Note : Integrative element ECO103_IE06

DNA sequence :
ATGAACAATCACTCAGAATCCGGTACAAAGCCGGAGAATCCCGCCTGCCAGCAGTGGGGGCTTAAATGTGCTATTACCCC
CTGTTTTGGTGCCCGCCTGGTACAGGAGGGCAACCGATTGCATTTTCTCTCTGACCGCGCAGGATTTAGCGGGGCATTTG
CCGTCGATGTTGCAATGCGCCTTGACCAGGCATTTCCGTTAATGATGAAGCAACTTGAGCTGATGCTGACCAGTGGAGAG
CTTAACCCTCGCCACCCACACTGCGTCACGCTTTACCACAATGGACTCACCTGTGAAGCCGATACACTAGGCTCCTGTGG
TTATGTCTACATTGCTATCTATCCTGAGCAAACTGAGCCGCAGTAA

Protein sequence :
MNNHSESGTKPENPACQQWGLKCAITPCFGARLVQEGNRLHFLSDRAGFSGAFAVDVAMRLDQAFPLMMKQLELMLTSGE
LNPRHPHCVTLYHNGLTCEADTLGSCGYVYIAIYPEQTEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 6e-35 78
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 9e-35 78
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 7e-34 77
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 3e-34 77
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-35 75
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-35 75
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-36 75
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-36 75
Z1220 NP_286755.1 structural protein Not tested TAI Protein 4e-33 73
Z1658 NP_287161.1 structural protein Not tested TAI Protein 4e-33 73
unnamed AAL08477.1 unknown Not tested SRL Protein 3e-33 70
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 8e-35 68
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 7e-35 68
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 4e-36 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_5087 YP_003224900.1 hypothetical protein VFG1681 Protein 3e-34 77
ECO103_5087 YP_003224900.1 hypothetical protein VFG0662 Protein 4e-36 75
ECO103_5087 YP_003224900.1 hypothetical protein VFG1068 Protein 1e-33 70
ECO103_5087 YP_003224900.1 hypothetical protein VFG1619 Protein 3e-35 68