Gene Information

Name : ECO103_5085 (ECO103_5085)
Accession : YP_003224898.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5288319 - 5288762 bp
Length : 444 bp
Strand : +
Note : Integrative element ECO103_IE06

DNA sequence :
ATGAATACACAAAATCTTGAGTTCGCTGAGCAGGCAGCAATAACTGCCTCAGCGGTCCCTGACGAGTTACGCATCGGCTT
CTGGCCGCAGCACTTTGGCTCCGTTCCGCAATGGATAACCCTGGAGTCCTGTATCTTTGACTGGATGGACCGCCTGTGTA
CCGATTATCACGGCGGTATCTGGAGCTTTTTGACGCTCAGCAATGGCGGCGCTTTTATGGCTCCTGAGTCAGAGCACGAT
GAGAAGTGGGCATTGTTCAACAGTATGAACGGCAACGGCGCGGAACTTACTGGCGAAGCCGCAGGGATAGTCGCCTGTCT
GATGACATACAGCCACCACGCTTGTCGCACCGAGTGTGACGCGATGACTGAGCACTATTATCGCTTACGAGACTTCGCGT
TGAACCATCCAGAGTGCAGCGCAATTATGCATCTCATCGACTGA

Protein sequence :
MNTQNLEFAEQAAITASAVPDELRIGFWPQHFGSVPQWITLESCIFDWMDRLCTDYHGGIWSFLTLSNGGAFMAPESEHD
EKWALFNSMNGNGAELTGEAAGIVACLMTYSHHACRTECDAMTEHYYRLRDFALNHPECSAIMHLID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 3e-43 73
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-42 71
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 2e-46 70
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 1e-46 70
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 7e-47 70
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 8e-46 70
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 1e-42 69
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 1e-42 69
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 2e-43 69
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 4e-42 69
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 4e-45 69
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 2e-45 69
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 1e-42 69
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 2e-43 69
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-42 68
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-42 68
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-42 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_5085 YP_003224898.1 hypothetical protein VFG1677 Protein 3e-47 70
ECO103_5085 YP_003224898.1 hypothetical protein VFG1527 Protein 7e-47 70
ECO103_5085 YP_003224898.1 hypothetical protein VFG0659 Protein 3e-43 69
ECO103_5085 YP_003224898.1 hypothetical protein VFG1616 Protein 1e-45 69