Gene Information

Name : ECO103_5081 (ECO103_5081)
Accession : YP_003224894.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : transcription repressor
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 5285598 - 5286314 bp
Length : 717 bp
Strand : +
Note : Integrative element ECO103_IE06

DNA sequence : 
ATGACGCTTCAGGAGCGGCGACATGACCGGCTTGCCGTCAGGTTGTCGTTGATTATCAGCCGCCTGGTGTCCGGTGAAAC
TCTGTTTATTCGCAAACTGGCAACTGAATTCGGGGTGTCAGAGCGCACGCTGCGTCGTGACTTTCGGGAACGTCTGATGT
ATCTCGACCTGGATTACTACCAGGGGCAGTGCAGTCTGCGCACGGATATTCACAGTACGCGGCAGGAAATAGATATTCTG
ACCTTTGCTCACCGCACGGGGCTGGCCGGGGTTTTCCCGGGCTTTGACCGGCGACTGGTCAGCAGCCTGCTGGACTGTGA
TGATCGACCCTGTCTGGTATGGCATCAGGACAGACCTCATCCCCCGGCAGGAAAGCTCTCCTTCTACAGGCTGGTCAGAG
CTATTTCGGGATGTCAGCGCATCACCATTCTGACTGAAGGGGAGCGTCATGAGGCCGTTGCACCTTACCGGCTAATCGCT
CTGGACGGTTACTGGTATCTTGTCGCTGAACATAACAGGCAATTACGTGTCTTCCGGCTGGGTGAGATTCATCTGGTAAG
GCCATCGCGGGAAACATTTATTCGCAGTGAGCTTCTCTATCAGCTGTCGGAGGACAAACATTTTATCTCTGCCTTACCTC
ATTTCCGTTTTATTCAGCAGTCGCTGAATTCATTTTCTCCATCAGAAAGTCGGGGGCAATCCGGACAAACTGATTAG

Protein sequence : 
MTLQERRHDRLAVRLSLIISRLVSGETLFIRKLATEFGVSERTLRRDFRERLMYLDLDYYQGQCSLRTDIHSTRQEIDIL
TFAHRTGLAGVFPGFDRRLVSSLLDCDDRPCLVWHQDRPHPPAGKLSFYRLVRAISGCQRITILTEGERHEAVAPYRLIA
LDGYWYLVAEHNRQLRVFRLGEIHLVRPSRETFIRSELLYQLSEDKHFISALPHFRFIQQSLNSFSPSESRGQSGQTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 4e-39 42
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 4e-39 42
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 3e-39 42
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 3e-39 42
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 1e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_5081 YP_003224894.1 transcription repressor VFG1613 Protein 1e-39 42
ECO103_5081 YP_003224894.1 transcription repressor VFG1523 Protein 8e-40 42