Gene Information

Name : ECO103_4912 (ECO103_4912)
Accession : YP_003224731.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 5093968 - 5094393 bp
Length : 426 bp
Strand : -
Note : Integrative element ECO103_IE05; predicted protein Orf1 in insertion sequence IS682

DNA sequence : 
ATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTATGGTTGAACTGGCATC
ACAACCTGGAGCTTGTGTTGCACAGATTGCACGAGAAAATGGCGTCAATGATAATGTTATTTTCAAATGGCTCAGGCTCT
GGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAA
ATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCACTTCCACTCAGACCAGAGTCAGTGC
CAGTTCCTGCAAGGTGGAATTCCGTCACGGTAACATGACGCTGGAAAATCCATCGCCAGAGCTGCTCACGATGTTAATCC
GCGAACTGAGCGGGAGGGGAAGATGA

Protein sequence : 
MELQDWRKEPRKKYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGHVSRRLPVTTSSDTGVELLPVE
ITPDEQKEPVAAIAPSLSTSTQTRVSASSCKVEFRHGNMTLENPSPELLTMLIRELSGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 3e-62 100
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 8e-57 90
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 4e-56 89
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 2e-44 88
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 7e-48 80
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 7e-48 80
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 4e-45 75
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 2e-31 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_4912 YP_003224731.1 hypothetical protein VFG1672 Protein 8e-45 88
ECO103_4912 YP_003224731.1 hypothetical protein VFG1666 Protein 2e-45 75
ECO103_4912 YP_003224731.1 hypothetical protein VFG1738 Protein 5e-32 54