Gene Information

Name : ECO103_4900 (ECO103_4900)
Accession : YP_003224719.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : :
COG ID : COG5218
EC number : -
Position : 5085841 - 5086449 bp
Length : 609 bp
Strand : -
Note : Integrative element ECO103_IE05

DNA sequence :
ATGAAAATGAAACAACAATATCAGACCCGCTACGAATCGCTCCACGAAAGCTACCAGAAATGGCTGACCGGCTTCACCCG
GCACGCTGTATCCTGGGGAGTGTGTCATCCGAATATCTACTACTTCCATAATCTGACGCCCGGATGGATATCATTCAATG
GTGAAAAACCCGAGATCGCCATCGTACCCCAGAGTCTGCACCGGCTGATTTATGGCCCTGACAAACGGACCACGCCGCCG
CTGGATGATGATCTGGTGGTGAACTTATGCACCAGTGAACATCTGCTGGTTCATCATCCGATGCTGGAAGGCATTCTGCT
GTCTGAATGTGAACGTCTGAAACATCATTCTCTGGCAAATAAACTGATCAGCCTCTTCCGTCAGTTTGGTGGCACAGAGT
TGCGCCTCAAACTGGTCTGGCTTTGCTGGCTTGATTTAATGACCGGAAACAGCCTTGAAGACTGGACAGAGAACCTGAAA
CGGAAATCAGAAAAAGAGCTGGAGGAATGGATCATCGACCGTCAGAAGCAGAACGCAGCACTGACGGATCTGATGGATCA
GTACGTGCTCCTGGCATACCGCACAACGGTTGACGATAACCGTAACTGA

Protein sequence :
MKMKQQYQTRYESLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLTPGWISFNGEKPEIAIVPQSLHRLIYGPDKRTTPP
LDDDLVVNLCTSEHLLVHHPMLEGILLSECERLKHHSLANKLISLFRQFGGTELRLKLVWLCWLDLMTGNSLEDWTENLK
RKSEKELEEWIIDRQKQNAALTDLMDQYVLLAYRTTVDDNRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3578 YP_003223439.1 hypothetical protein Not tested LEE Protein 1e-92 100
unnamed AAL08467.1 unknown Not tested SRL Protein 9e-90 95
unnamed ADD91711.1 putative acyl-CoA dehydrogenase Not tested PAI-I AL862 Protein 2e-88 94
unnamed CAE85188.1 hypothetical protein Not tested PAI V 536 Protein 1e-88 94
unnamed CAI43836.1 hypothetical protein Not tested LEE Protein 7e-91 94
aec62 AAW51745.1 Aec62 Not tested AGI-3 Protein 1e-73 93
APECO1_1087 YP_853107.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-86 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_4900 YP_003224719.1 hypothetical protein VFG1058 Protein 4e-90 95