Gene Information

Name : ECO103_4894 (ECO103_4894)
Accession : YP_003224715.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5077119 - 5077937 bp
Length : 819 bp
Strand : -
Note : Integrative element ECO103_IE05

DNA sequence :
ATGCGACTAGCCAGTCGTTTTGGTTATACGAACCAGATACGCCGTGACCGTCCGCTGACACACGAAGAACTGATGCACTA
TGTTCCCAGTATTTTCGGTGAAGACCGGCATACTTCCCGCAGTAAACGATATGCGTACATTCCCACCATCACCGTACTGG
AAAGCCTGCAGCGGGAAGGCTTTCAGCCATTCTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATACACA
AAACATATGCTGCGTCTGCGGCGGGCCGGAGAGATAAACGGAGAACATGTCCCTGAAATCATTCTGCTCAACTCCCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGTCAGAACGGATGCGTCTGTGGTCAGTCTCTGG
GGGAAGTGCGTGTTCCGCATCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGCGTGTTTGAC
CGGATAGAGGAGAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCTGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCGGCCCGTCACCACCGCCGACATTCTGACGCCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTACTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGCCGCAGTGCAAAAGGAAAA
CGTATCCACACCCGTGCCATTCACAGCATCGACACCGATATTAAGCTCAACCGCGCATTGTGGGTGATGGCAGAAACGCT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYTNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSKRYAYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPARLALAQAALTYRYGDEHRPVTTADILTPRRREDYGKDLWSTYQTIQENMLKGGISGRSAKGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 3e-119 100
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-117 97
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-117 97
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-117 97
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 9e-116 95
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 3e-114 95
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 9e-116 95
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-110 92
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-112 92
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-112 92
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-112 92
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-110 92
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-107 91
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-108 91
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-109 90
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 6e-72 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 7e-72 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_4894 YP_003224715.1 hypothetical protein VFG1676 Protein 2e-114 95
ECO103_4894 YP_003224715.1 hypothetical protein VFG0658 Protein 4e-116 95
ECO103_4894 YP_003224715.1 hypothetical protein VFG1615 Protein 6e-108 91
ECO103_4894 YP_003224715.1 hypothetical protein VFG1526 Protein 6e-109 91