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Name : ECO103_4690 (ECO103_4690) Accession : YP_003224519.1 Strain : Escherichia coli 12009 Genome accession: NC_013353 Putative virulence/resistance : Virulence Product : fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 4828058 - 4830589 bp Length : 2532 bp Strand : + Note : - DNA sequence : ATGCATTGGATGCATTTACCTCTCTATCACTACAGAGCGCATTTTTCCTTCTCTCTGCTGGCATTAACGATTGCCAGCTC GTTACCTGCGTATGGCGGAAAATTTAACCCTAAATTTCTCGAAAACGTTCAGGGTATCGATCAACACATCGACTTGTCGG TATACGACTCACCTGTCGGCCAGCAAATCCCCGGTAAATACCGGGTTTCGGTGTTTGTAAACGAAGAAAAAATGGCTTCC CGGACGCTGGATTTTAGTACCGCCAGCGAAGCGAAACGCAAAGCCAGCGGTGAGTCGCTTATGCCTTGCCTTAGCCGGGT GCAACTGGAAGAAATGGGCGTGCGCGTTGACAGCTTTCCGGCGCTGAAGATGTCACCACCAGAAGCCTGCGTAGCGTTTG ATGAAATCATTCCCCAGGCCACCAGCCGCTTTGATTTTAATACTCAGACGCTGCATCTTTCCTTTCCACAGGCGGCAATG ATGATGACCGCTCGCGGCACGGTTGATCCTTCTCGCTGGGACGAAGGAATACCTGCGCTGTTGCTGGATTACAGCTTTAG TGGCAGCAATGGACGCAATGAAGGTACAGGTTCATCTTCAGATTCGACCAGTGACAGTTATTACCTGAACCTGCGCAGCG GTTTGAACGTTGGTCCGTGGCGTTTACGTAATAACAGTATCTGGAACCGTACCGATGGCAAAAACCAATGGGATAACGTT GGTACATCGTTAAACCGGGCAATTATTCCACTTAAATCACAGATAACTCTGGGTGATACCGCCACGCCTGGCGAGATTTT TGATAGCGTACAAATGCGTGGGGCGTTACTGGCATCCGACGATGAAATGTTGCCGGACAGCCAGCGTGGCTTTGCTCCGG TAGTGCGCGGCATCGCCAAAAGCAACGCTGAAGTGAGTATCGAACAGAACGGCTATGTCATTTATCGCACTTTTGTTCAG CCGGGTGCATTTGAGATTAACGATCTCTACGCAACCTCCGGCAGCGGCGACCTGACGGTGATCATTAAAGAAGCCGACGG AAGTGAACAACGTTTTATCCAGCCGTTTTCGGCGGTGGCGATTTTCCAGCGTGAAGGGTATCTGAAATACAGTCTGGCTG CCGGTGAATATCGTGCTGGTAATTACGACAGCGATAAACCACATTTCGGGCAGTTTACCGCCATGTACGGCTTGCCGTGG GGTATGACCGCCTACGGTGGTGCATTGTTGTCGGCAGATTACAACGCTTTAGCTCTGGGCCTGGGGAAAAACTTCGGTAC CATTGGCGCAGTATCGGTGGATGTCACTCAGGCGAAAAGTCAGTTACGCAACAATGAAAAAGAGGAAGGCCAGTCTTATC GCTTCCTCTATTCGAAAAGTTTTGAGGGTGGCACTGACCTGCGTCTGTTGGGCTACAAATACTCAACCAGCGGCTACTAC ACCTTCCAGGAAGCAACTGATGTTCGCAGTGACGCCGACAGTGATTACCGCCGTTATCACAAGCGCAGCCAGATACAGGG CAATATTACCCAGCAACTGGGAGACTACGGCTCGGTTTATTTCAATATGACGCAGCAGGATTACTGGAACGTTGACGGTA AGGAAAACTCCTTAAGCGCCGGTTATCACGGTCACATTGGTCGGGTGAATTACAGCGTGGCCTATACCTGGACGAGAAGT CCGGAATGGGAAGAAGACGATCGCTTGTGGTCATTCAGTGTTTCCATCCCTCTGGGGGGCGCGTGGAGCAGTTATCGCAT GACTACCGACCAGAATGGCAAGACGTCGCAACAGGCCTCTGTTAGCGGCACGTTACTGGAAGATCGTAACCTGAGCTATA ACGTTCAGCAGGGTTACACCAGTAATGGCGTAGGCTACAGTGGCAGCGTCAACATGGGGTATATGGGTGGCTCTGGTAAC ATTGACGTAGGCTATAACTATTCTAAAGATAACCAACAGGTTAACTATGGCGTGCGCGGCGGTGTCATCGTTCACAGTGA AGGTATAACGCTTTCGCAGCCTTTAGGCGAAAGTCTGGCGATTGTTTCTGCACCGGGCGCGCGTGGTGGACATGTGGTTA ACAGCAGCGGCGTAGAAGTTGACTGGATGGGCAACGCCGTGGTGCCTTATCTCACACCATATCGTGAAACCATTGTGGAA TTGCGTAGCGACACGTTGGGGCAAAACGTTGAACTACAGGAAGCGTTCCAGAAAGTCGTGCCTACTCGTGGTGCAGTTGT GCGTTCCCGCTTTGATACCCGCGTCGGTTACCGTGTGCTGATGAGCTTAAAACAGGCGAATGGCAACGCAGTACCGTTTG GTGCAACCGCAGCGTTAATTGATGAGAGCAAACCTGCCAGCAGCATTGTGGGTGAAGAAGGACAGCTTTATATCAGCGGG ATGCCAGAAGAGGGCGAATTGCAGGTGAGCTGGGGGAACGAGCAGGCGCAACGTTGCCGTGTGCCATTCCGCTTGCCAGA GAACAAGGACAATGCGGCTATCGTGATGGTTAATGCGGTATGCGAGAAATAA Protein sequence : MHWMHLPLYHYRAHFSFSLLALTIASSLPAYGGKFNPKFLENVQGIDQHIDLSVYDSPVGQQIPGKYRVSVFVNEEKMAS RTLDFSTASEAKRKASGESLMPCLSRVQLEEMGVRVDSFPALKMSPPEACVAFDEIIPQATSRFDFNTQTLHLSFPQAAM MMTARGTVDPSRWDEGIPALLLDYSFSGSNGRNEGTGSSSDSTSDSYYLNLRSGLNVGPWRLRNNSIWNRTDGKNQWDNV GTSLNRAIIPLKSQITLGDTATPGEIFDSVQMRGALLASDDEMLPDSQRGFAPVVRGIAKSNAEVSIEQNGYVIYRTFVQ PGAFEINDLYATSGSGDLTVIIKEADGSEQRFIQPFSAVAIFQREGYLKYSLAAGEYRAGNYDSDKPHFGQFTAMYGLPW GMTAYGGALLSADYNALALGLGKNFGTIGAVSVDVTQAKSQLRNNEKEEGQSYRFLYSKSFEGGTDLRLLGYKYSTSGYY TFQEATDVRSDADSDYRRYHKRSQIQGNITQQLGDYGSVYFNMTQQDYWNVDGKENSLSAGYHGHIGRVNYSVAYTWTRS PEWEEDDRLWSFSVSIPLGGAWSSYRMTTDQNGKTSQQASVSGTLLEDRNLSYNVQQGYTSNGVGYSGSVNMGYMGGSGN IDVGYNYSKDNQQVNYGVRGGVIVHSEGITLSQPLGESLAIVSAPGARGGHVVNSSGVEVDWMGNAVVPYLTPYRETIVE LRSDTLGQNVELQEAFQKVVPTRGAVVRSRFDTRVGYRVLMSLKQANGNAVPFGATAALIDESKPASSIVGEEGQLYISG MPEEGELQVSWGNEQAQRCRVPFRLPENKDNAAIVMVNAVCEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 4e-163 | 43 |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 1e-139 | 41 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 1e-163 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO103_4690 | YP_003224519.1 | fimbrial usher protein | VFG0454 | Protein | 0.0 | 74 |
| ECO103_4690 | YP_003224519.1 | fimbrial usher protein | VFG0876 | Protein | 1e-167 | 44 |
| ECO103_4690 | YP_003224519.1 | fimbrial usher protein | VFG0446 | Protein | 5e-155 | 42 |
| ECO103_4690 | YP_003224519.1 | fimbrial usher protein | VFG1645 | Protein | 7e-164 | 41 |
| ECO103_4690 | YP_003224519.1 | fimbrial usher protein | VFG0912 | Protein | 2e-163 | 41 |
