Gene Information

Name : ECO103_4524 (ECO103_4524)
Accession : YP_003224355.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : transcriptional regulator Pch-homolog
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4653887 - 4654177 bp
Length : 291 bp
Strand : -
Note : Prophage ECO103_P14

DNA sequence : 
ATGACGGACAGCGTGGCACAGAAACTTGAGGAGCGCGGTTTATGGCGACGTGCGGCGACCCGATGGGCTGAGGTTCTTCT
TCACGCAGAAACGGACAGTGAACGCGAGGAAGCTGCCAGACGTCGGGCGATATGCATCAGTAAAACCCGTCGTATGCCTG
AGCAGTTCGTCACCTTTGGCGATGTGAAAAAGGCCGCAGACAGAACGCTGAAAGAGATGGGGATTAATCCGCAGGATGAA
TGGAGAAATTACAGCTTCAGTGATGCAGGCGACGATTTAGCGCTACCGTGA

Protein sequence : 
MTDSVAQKLEERGLWRRAATRWAEVLLHAETDSEREEAARRRAICISKTRRMPEQFVTFGDVKKAADRTLKEMGINPQDE
WRNYSFSDAGDDLALP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3504 YP_854275.1 hypothetical protein Not tested PAI I APEC-O1 Protein 0.003 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_4524 YP_003224355.1 transcriptional regulator Pch-homolog VFG0765 Protein 2e-08 43