Gene Information

Name : ECO103_3809 (ECO103_3809)
Accession : YP_003223654.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Unknown
Product : helicase
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 3880742 - 3883102 bp
Length : 2361 bp
Strand : -
Note : Integrative element ECO103_IE04

DNA sequence :
ATGGTTCATAAATCTGACAGCGATGAATTAGCTGCATTGAGGGCAGAAAATGCCCGTCTGGTCTCATTACTTGAAGCTCA
TGGGATTGAATGGCGACGTAAACCGCCGATCTCTGTGCAGCGCGTTTCTGTATTATCCACCAATGAGAAGGTTGCATTAT
TTCGTCGGTTGTTTCGCGGGCGTGATGATGTATGGGCACTTAGATGGGAAAGTAAAACCAGCGGCAAATCAGGGTACTCT
CCTGCCTGCGCTAACGAATGGCAGGCGAGAATATGCGGTAAGCCCCGGATAAAATGTGGGGACTGCGCTCACCGTCAGTT
GATTCCTGTATCTGATCTCGTCATCTACTACCATCTGGCAGGTACCCATACTGTCGGGATGTATCCGTTGCTGGAAGATG
ATTCCTGTTATTTTCTGGCAGTTGATTTTGATGAAGCTGAATGGCAGAAGGATGCATCCGCATTCATGCGATCCTGTGAT
GAGCTGGGTGTACCCGCTGCGCTGGAAATATCCCGTTCACGTCAGGGAGCGCATGTCTGGATATTTTTTGCTTCACGAGT
TTCGGCCCGCGAAGCTCGCCGTCTGGGGACTGCTATTATTAGTTATACGTGTAATCGAACTCGACAGCTGCGATTGGGTT
CTTATGACCGATTATTTCCTAATCAGGATACGATGCCAAAAGGGGGATTTGGTAATCTCATAGCATTACCTCTGCAAAAA
AGACCGCGTGAATCGGGGGGAAGTGTTTTTGTTGATATGAATTTCCAGCCTTATTCTGATCAATGGGCTTTTCTTGCATC
GGTGATCCCGATGAATGTGCAGAATATTGAACCGACGATATTACGGGCTACAGGAAGTATCCATCCTCTGGATGTGAACT
TTATCAACGAAGAAGACCTGGGTACGCCATGGGAAGGGAAAAAATCATCAGGAAACAGACTGAATATTTCTATTGCAGAA
CCGCTGAAAATCACGCTGGCAAACCAGATCTATTTCGAAAAAGCGCAATTACCTCAGGTGCTGATTAACCGACTTATTCG
GCTGGCAGCATTTCCGAACCCTGAGTTTTATAAGGCTCAGGCAATGCGTATGTCAGTCTGGAATAAGCCCCGTGTTATAG
GTTGTGCGGAGAATTACCCGCAACACATTGCGTTGCCCCAGGGATGTCTGGACAGCGTATTATCTTTCCTTAGGGACAAC
AATATTGCTGCAGAATTAATCGATAAACGATTTGCCGGGACGGAATGTAATGCCGTTTTTATGGGAAACCTCAGAGCGGA
GCAGGAAGAGGCCGTTTCGGGATTACTCCGTTATGACACTGGTGTGCTTTGTGCGCCAACGGCTTTTGGTAAGACAGTTA
CCGCAGCGGCAGTGATTGCCAGACGGAAAGTGAATACACTGATACTGGTACACCGGACTGAATTGCTGAAGCAGTGGCAG
GAGCGTCTCGCGGTGTTTCTGCAGGTTGGTGACAATATTGGTATTATCGGGGGAGGTAAACATAAACCCTGTGGCAATAT
TGATATTGCGGTGGTGCAGTCCATATCCAGACACGGAGAAGTTGAACCTCTGGTCAGGAATTATGGGCAAATCATTGTGG
ATGAGTGCCATCATATTGGCGCGGTTTCATTTTCTGCGATTCTGAAGGAAACGAATGCCAGATATCTGCTTGGCCTGACG
GCAACACCAATCCGACGGGATGGTCTGCATCCCATTATTTTTATGTACTGTGGTGCCATTCGCCATACAGCGGTCCGCCC
GAAGGAAAGCCCACATAATCTGGAGGTACTGACCCGTTCCCGTTTTACATCTGGTCATTTACCATCGGATGCGAGAATCC
AGGATATTTTCAGAGAAATTGCTCTGGATCATGACAGAACGGTGGCGATAGCTGAAGAAGCCATGAAAGCTTTCGGGCAG
GGGCGAAAAGTTCTGGTACTGACTGAACGTACAGATCATCTGGATGAGATAGCATCAGTGATGAATTCACTGAAATTGTC
CCCCTTTATTCTCCATGGACGACTATCGAAAAAAAAGCGTGCGATGCTGATATCCGGGCTGAATGCTCTTCCTCCTGATT
CTCCCCGTATTTTGTTGTCAACAGGCAGACTTATTGGTGAGGGATTTGACCACCCTCCGCTGGATACGCTGATTCTTGCC
ATGCCTGTGTCATGGAAAGGGACATTACAGCAGTATGCGGGACGTCTACACAGAGAGCATACCGGTAAAAGCGATGTCAG
GATCATTGATTTTGTGGATACCGCGTATCCAGTGCTGCTCAGAATGTGGGATAAACGCCAGCGGGGTTATAAGGCGATGG
GGTACAGGATTGTGGCTGATGGTGAAGGGCTTTCATTTTAA

Protein sequence :
MVHKSDSDELAALRAENARLVSLLEAHGIEWRRKPPISVQRVSVLSTNEKVALFRRLFRGRDDVWALRWESKTSGKSGYS
PACANEWQARICGKPRIKCGDCAHRQLIPVSDLVIYYHLAGTHTVGMYPLLEDDSCYFLAVDFDEAEWQKDASAFMRSCD
ELGVPAALEISRSRQGAHVWIFFASRVSAREARRLGTAIISYTCNRTRQLRLGSYDRLFPNQDTMPKGGFGNLIALPLQK
RPRESGGSVFVDMNFQPYSDQWAFLASVIPMNVQNIEPTILRATGSIHPLDVNFINEEDLGTPWEGKKSSGNRLNISIAE
PLKITLANQIYFEKAQLPQVLINRLIRLAAFPNPEFYKAQAMRMSVWNKPRVIGCAENYPQHIALPQGCLDSVLSFLRDN
NIAAELIDKRFAGTECNAVFMGNLRAEQEEAVSGLLRYDTGVLCAPTAFGKTVTAAAVIARRKVNTLILVHRTELLKQWQ
ERLAVFLQVGDNIGIIGGGKHKPCGNIDIAVVQSISRHGEVEPLVRNYGQIIVDECHHIGAVSFSAILKETNARYLLGLT
ATPIRRDGLHPIIFMYCGAIRHTAVRPKESPHNLEVLTRSRFTSGHLPSDARIQDIFREIALDHDRTVAIAEEAMKAFGQ
GRKVLVLTERTDHLDEIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRILLSTGRLIGEGFDHPPLDTLILA
MPVSWKGTLQQYAGRLHREHTGKSDVRIIDFVDTAYPVLLRMWDKRQRGYKAMGYRIVADGEGLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 0.0 98
Z1568 NP_287072.1 helicase Not tested TAI Protein 0.0 98