Gene Information

Name : ECO103_3806 (ECO103_3806)
Accession : YP_003223651.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 3878136 - 3878537 bp
Length : 402 bp
Strand : +
Note : Integrative element ECO103_IE04; predicted protein Orf1 in insertion sequence ISEc8

DNA sequence :
GTGGGAACCAAAGTGTCAGATATGCAGAAAAATGTGACTCCCGGCAGGCGAAAAGGCTGCCCTAATTATCCTCCCGAATT
TAAACAGCAGCTCGTTGCTGCCTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCCA
ATCTGTTGTTCAAATGGCGACAACAATGGCGCGAGGGAAAGCTGCTATTACCTTCTTCAGAGAGCCCCCAGCTACTTCCT
GTGACTCTCGATGCAGCTGCCGAACAGCCAGAATCGCTCGCAGAGGACCCGGAAACCCTCAGTATCAGCTGTGAGGTAAC
GTTCCGGCACGGGACGCTCCGCTTCAATGGCAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGAT
GA

Protein sequence :
MGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLP
VTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99257.1 unknown Not tested LEE Protein 3e-47 100
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 3e-47 100
unnamed AAC31492.1 L0013 Not tested LEE Protein 2e-50 100
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-50 100
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 3e-50 100
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 3e-50 100
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 5e-47 99
unnamed AAL08462.1 unknown Not tested SRL Protein 1e-49 99
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-24 54
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 2e-24 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3806 YP_003223651.1 hypothetical protein VFG1708 Protein 7e-51 100
ECO103_3806 YP_003223651.1 hypothetical protein VFG0791 Protein 7e-51 100
ECO103_3806 YP_003223651.1 hypothetical protein VFG1053 Protein 4e-50 99
ECO103_3806 YP_003223651.1 hypothetical protein VFG1518 Protein 2e-47 99
ECO103_3806 YP_003223651.1 hypothetical protein VFG1697 Protein 6e-25 54