Gene Information

Name : ECO103_3757 (ECO103_3757)
Accession : YP_003223609.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3830955 - 3831776 bp
Length : 822 bp
Strand : -
Note : Integrative element ECO103_IE04

DNA sequence :
ATGCGATTAGCCAGTCGTTTTGGTTATGCTGCAAACCAGATACGCCGTGACCGTCCGCTGACACATGAAGAGCTGATGCA
CCATGTGCCGGGGATTTTCGGAGAAGATAAACACACGTCCCGAAGCCAGAACTATACGTACATCCCCACCATCACCGTAC
TGGAAAGTCTGCAGCGGGAAGGCTTCCAGCCCTTTTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATAC
ACAAAACACATGCTGCGTCTGCGGCGGGCCGGAGAGATAAACGGAGAACATGTCCCTGAAATCATTCTGCTCAACTCCCA
TGACGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCCGGTTCGTCTGCCAGAACGGGTGCGTCTGTGGTCAGTCTC
TGGGGGAAGTGCGTGTTCCACACCGGGGAAATGTGGTGCAGAAAGTCATTGAAGGGGCTTACGAGGTGGTGGGCGTGTTT
GACCGGATAGAGGAGAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGC
ACTGACTTACCGTTATGGTGACGAACATCAGCCCGTCACTATCGCCGACATTCTGACACCGCGACGCCGGGAGGATTACG
GTAAGGACCTGTGGAGTGCTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCAAAAGGA
AAACGTATCCACACCCGTGCCATTCACAGCATCGACACCGATATTAAGCTCAACCGCGCATTGTGGGTGATGGCAGAAAC
GCTGCTGGAGAGCATGCGCTGA

Protein sequence :
MRLASRFGYAANQIRRDRPLTHEELMHHVPGIFGEDKHTSRSQNYTYIPTITVLESLQREGFQPFFACQTRVRDPGRRGY
TKHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVQKVIEGAYEVVGVF
DRIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTIADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKG
KRIHTRAIHSIDTDIKLNRALWVMAETLLESMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 8e-118 98
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 8e-118 98
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 8e-118 98
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 3e-118 97
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 3e-118 97
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 1e-115 95
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-114 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 2e-115 94
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-114 94
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-114 94
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-111 91
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-111 91
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-109 90
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-110 90
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-107 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-72 54
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 5e-72 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3757 YP_003223609.1 hypothetical protein VFG0658 Protein 1e-118 97
ECO103_3757 YP_003223609.1 hypothetical protein VFG1676 Protein 1e-115 94
ECO103_3757 YP_003223609.1 hypothetical protein VFG1526 Protein 2e-109 90
ECO103_3757 YP_003223609.1 hypothetical protein VFG1615 Protein 6e-108 89