Gene Information

Name : ECO103_3749 (ECO103_3749)
Accession : YP_003223601.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3826817 - 3827662 bp
Length : 846 bp
Strand : -
Note : Integrative element ECO103_IE04

DNA sequence :
ATGTCTGCAATCACAGTCTCCCGTCCGGAAGTGGTCACCGGGCATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGGCTGTACGAAAGAGTTCACTGCTGCAAATCGACACACTTATCCGACAACTGGTAGAAATCTCGGTACTGACAGAAA
GTATTGGAGGTAAAACTGCTCTGGACTGGGCCATGAAACAGGATTTTCGCTGTGGCTGCTGGCTCATGGAGAAACCGGAA
ACCGCAATGAAAGCCATCACCCGCAATCTTGACCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATGCGCAGGCCCGTGATACATGGTACCGATCACTGGAGTACGATAATTTTCCGGAAATCAGTGAAGCGAACATTT
GGAGCACATTTGAGCAACTGCACCAGAATAAAGATGAAGTGTTTGAGCGAGGAGTGATCAACGTCTTCAGAGGGCTGAGC
TGGAATTACAAAACCAACTCCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGGACAGATGGGG
ATTTCACCTTATCACCGGGCAACAGGCAGATGGACTCGCCGACCTGGAAAGAATGCTGCATCTGTTCAGCGGCAAACCGC
TCCCCGACAACCGGGAAAACATCACCCTTCGTCTGGATGATCACATTCAGTCTGTTCAGGGTAAAGAGGACTATGAAGAT
GAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCACACATCACGTTCAGAAAACCGGAACTGGTTGATCGGCTAAA
TGACATCATTGCGAAGCATTATCCGGGGCAACTATCAGCCATCTGA

Protein sequence :
MSAITVSRPEVVTGHTDVICSTSIRHILAVRKSSLLQIDTLIRQLVEISVLTESIGGKTALDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLS
WNYKTNSPCKFGSKIIVNNLVRWDRWGFHLITGQQADGLADLERMLHLFSGKPLPDNRENITLRLDDHIQSVQGKEDYED
EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPGQLSAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-123 94
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-123 94
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 7e-123 93
unnamed AAL57572.1 unknown Not tested LEE Protein 8e-122 93
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 8e-121 93
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 4e-120 90
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 3e-118 89
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 2e-118 89
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 3e-118 89
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-119 89
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-118 89
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-119 89
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 8e-119 89
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 4e-118 89
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 6e-107 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3749 YP_003223601.1 hypothetical protein VFG1533 Protein 4e-123 93
ECO103_3749 YP_003223601.1 hypothetical protein VFG0666 Protein 1e-118 89
ECO103_3749 YP_003223601.1 hypothetical protein VFG1685 Protein 3e-107 86