Gene Information

Name : ECO103_3640 (ECO103_3640)
Accession : YP_003223497.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : T3SS component
Function : -
COG functional category : S : Function unknown
COG ID : COG3204
EC number : -
Position : 3712571 - 3713389 bp
Length : 819 bp
Strand : +
Note : Integrative element ECO103_IE03

DNA sequence : 
ATGAAAAGAAGCTTATTTATTGCATTTTTTATTGCAATGTTTGTCACACCAATTGCATTAATATTATTTGTATTTGATTA
TGGTTACAAAAAATCACCACAGGAATACTCACTTTCATTTATAAAACAATTACCAAATACGGTGAACTTATCATCTCTTA
CGTATAATAAAGAGGATGATTTCCTGTATGCCACCCAGAATAGCCCTGCGCAGCTACTTAAAATAGCCAGAAGTGGCGAC
ATCATCGGCCGAGCCCCGCTGCCTTTTATCTCTGATGCCGAAACCATTGAGCACATACAAGGGAACATTTTTGCTGCAGT
AGACGAAAAGACTTCTGAACTATTCTTTTTTACAGTTACAAAAGATATGCATATCTCCTTGCGAAATAAAATTCAGTTAG
AAAAATTCAATAAAAAAAATAGAGGGTTTGAAGGACTGGCATGGAAAGCAGAAGGCCGGATGCTGTTTGTCGCTAAAGAA
CGACGCCCTACAGGCATGTTTGCCTATCAGCTTTCTCCAGATCTGCTGAGTGCAAAACAAGTAACGATTCCAGAGGAACT
AAATGATATACATGTTAAAGATATATCCGGCCTGGACTTTAATAATGAAAGTCTGATGATTCTGTCCGATGAATCGCGTA
AGTTACTCAAGTTTAACCTGACAGAAATGTCTTTCGTTGAGATGATGGACCTGACAAAAGGAAATCATTCTCTGACCAGT
GATTTGCTCCAACCTGAAGGCATTGTAACTCTGCCTGATGAAAGCATTTATGTCGCTAGTGAACCTGATATCCTCGCTAA
ATTTGTCCCTAATAAATAA

Protein sequence : 
MKRSLFIAFFIAMFVTPIALILFVFDYGYKKSPQEYSLSFIKQLPNTVNLSSLTYNKEDDFLYATQNSPAQLLKIARSGD
IIGRAPLPFISDAETIEHIQGNIFAAVDEKTSELFFFTVTKDMHISLRNKIQLEKFNKKNRGFEGLAWKAEGRMLFVAKE
RRPTGMFAYQLSPDLLSAKQVTIPEELNDIHVKDISGLDFNNESLMILSDESRKLLKFNLTEMSFVEMMDLTKGNHSLTS
DLLQPEGIVTLPDESIYVASEPDILAKFVPNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3640 YP_003223497.1 T3SS component Virulence LEE Protein 9e-125 100
unnamed CAI43896.1 hypothetical protein Not tested LEE Protein 7e-125 100
unnamed AAK26694.1 unknown Not tested LEE Protein 5e-124 99
st03 CAC81841.1 ST03 protein Not tested LEE II Protein 5e-124 99
unnamed AAL57521.1 unknown Not tested LEE Protein 3e-124 99
ECO26_5249 YP_003232131.1 hypothetical protein Not tested LEE Protein 6e-124 99
unnamed AAL57582.1 unknown Not tested LEE Protein 1e-124 99
ECs4591 NP_312618.1 hypothetical protein Not tested LEE Protein 6e-105 91
unnamed AAC31535.1 L0056 Not tested LEE Protein 5e-105 91
unnamed ACU09480.1 hypothetical protein Not tested LEE Protein 5e-105 91
Z5143 NP_290290.1 hypothetical protein Not tested LEE Protein 6e-105 91
rorf1 AAC38362.1 rOrf1 Not tested LEE Protein 5e-109 88
ECO111_3730 YP_003236066.1 hypothetical protein Not tested LEE Protein 1e-107 86
unnamed AAL06388.1 unknown Not tested LEE Protein 7e-105 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3640 YP_003223497.1 T3SS component VFG0834 Protein 3e-105 91
ECO103_3640 YP_003223497.1 T3SS component VFG0708 Protein 3e-109 88