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Name : ler (ECO103_3638) Accession : YP_003223495.1 Strain : Escherichia coli 12009 Genome accession: NC_013353 Putative virulence/resistance : Virulence Product : transcription regulator Ler Function : - COG functional category : R : General function prediction only COG ID : COG2916 EC number : - Position : 3709699 - 3710088 bp Length : 390 bp Strand : - Note : Integrative element ECO103_IE03 DNA sequence : ATGCGGAGATTATTTATTATGAATATGGAAACTAATTCGCACACAACAAGCCCATACATTCAGCTTATTGAGCAAATTGA AGTGTTACAACAGGAAGCAAAGCGACTGCGAGAGCAGGAAATTCAAAGTGTAATTGAGTCGATTCAAAAGCAGATTACTT ATTACAATATAACCCTACAAGAGCTGGGATATACTAATGTGCCTGATGATGGCCTTGCTCGCCGGAACTCATCGAAAGGA GTTTATTATCGCAATGAAGAAGGGCAGACCTGGTCGGGAGTTGGCCGACAGCCACGCTGGCTTAAAGAAGCACTGTTGAA TGGAATGAAGAAAGAAGATTTTCTTGTGAAGGACACCGAAGACGAAATAATACCGCTGAAAAATATTTAA Protein sequence : MRRLFIMNMETNSHTTSPYIQLIEQIEVLQQEAKRLREQEIQSVIESIQKQITYYNITLQELGYTNVPDDGLARRNSSKG VYYRNEEGQTWSGVGRQPRWLKEALLNGMKKEDFLVKDTEDEIIPLKNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ler | YP_003223495.1 | transcription regulator Ler | Not tested | LEE | Protein | 7e-49 | 100 |
| ler | AAK26696.1 | Ler | Virulence | LEE | Protein | 5e-49 | 100 |
| ler | YP_003232133.1 | transcriptional regulator Ler | Not tested | LEE | Protein | 7e-49 | 100 |
| ler | AAL57523.1 | Ler | Virulence | LEE | Protein | 5e-49 | 100 |
| ler | AAL57584.1 | Ler | Virulence | LEE | Protein | 5e-49 | 100 |
| ler | CAC81843.1 | Ler protein | Not tested | LEE II | Protein | 5e-49 | 100 |
| ler | CAI43893.1 | LEE encoded regulator | Virulence | LEE | Protein | 3e-40 | 100 |
| ler | YP_003236108.1 | transcriptional regulator Ler | Not tested | LEE | Protein | 7e-49 | 98 |
| unnamed | AAC38364.1 | Orf1 | Virulence | LEE | Protein | 5e-49 | 98 |
| ler | ACU09478.1 | transcription regulator Ler | Not tested | LEE | Protein | 9e-49 | 97 |
| Z5140 | NP_290288.1 | hypothetical protein | Not tested | LEE | Protein | 1e-48 | 97 |
| unnamed | AAC31533.1 | L0054 | Not tested | LEE | Protein | 9e-49 | 97 |
| ECs4588 | NP_312615.1 | hypothetical protein | Virulence | LEE | Protein | 1e-48 | 97 |
| unnamed | AAL06349.1 | LEE-encoded regulator | Virulence | LEE | Protein | 4e-45 | 90 |
| ler | AFO66332.1 | locus of enterocyte effacement-encoded regulator | Virulence | SESS LEE | Protein | 3e-30 | 68 |
| ler | AFO66395.1 | locus of enterocyte effacement (LEE)-encoded regulator | Virulence | SESS LEE | Protein | 3e-30 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ler | YP_003223495.1 | transcription regulator Ler | VFG0710 | Protein | 2e-49 | 98 |
| ler | YP_003223495.1 | transcription regulator Ler | VFG0832 | Protein | 4e-49 | 97 |
