Gene Information

Name : ECO103_3634 (ECO103_3634)
Accession : YP_003223491.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : T3SS component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3707903 - 3708598 bp
Length : 696 bp
Strand : -
Note : Integrative element ECO103_IE03

DNA sequence :
ATGATTTATTTCTTAACAGACTTAATAAAATTTTATTGCCTTATGAAACTTTATGAATATAAAAATATAAAAATTGATTT
AGTGCTTACGGAAGATATCATACCAGAAGATAAGTTACTGGAAATTATTCAATCTGATGATATAGTCAAGTTGGCTCGAA
AAAAAACATGTGAACATTTACTGAGGGCGAGGAGGAAGTCGAAAAAATTAAAGACAGAATCCAGAAAAAAAATCGCCAGA
AAAATAATGGCAATGAGAGAAAGGATTCGAAAAAATAATAAAATAAAATTAGAGAAAGAAGTTAACAAATCGATAAAATG
GGTTAAAGATATTCAGGATATCGAGTTGGTCTTAATGCAGGACATAATGAATAAGGTTCATTCGTCACTGACTAATGCAT
TACATTCTTTAGACACATCATCAAGAATTAATTGGGATGATTTACTTAATGAAGTCGTAAGGGAAACGCTTTCCCATAAC
AATATTGTTGGAGCTATTAAGATCACTAAAAACCCAGACATTAAACTTGATCCTGGAGAGGCTAATAATATACAGCTTAT
TAATGATGCAGACGCACCACTTAATAAGATAATAATAGAAAATGAATATATGAGAATAACTGTAGATCCGTTAGAACAAA
TAAATATTTTATTGAATTCATTTAAAGAGAATTATCTTAGCATTATTCAGGAATGA

Protein sequence :
MIYFLTDLIKFYCLMKLYEYKNIKIDLVLTEDIIPEDKLLEIIQSDDIVKLARKKTCEHLLRARRKSKKLKTESRKKIAR
KIMAMRERIRKNNKIKLEKEVNKSIKWVKDIQDIELVLMQDIMNKVHSSLTNALHSLDTSSRINWDDLLNEVVRETLSHN
NIVGAIKITKNPDIKLDPGEANNIQLINDADAPLNKIIIENEYMRITVDPLEQINILLNSFKENYLSIIQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3634 YP_003223491.1 T3SS component Virulence LEE Protein 2e-91 100
unnamed AAK26699.1 unknown Not tested LEE Protein 3e-91 99
ECO26_5255 YP_003232137.1 T3SS component Virulence LEE Protein 9e-91 99
unnamed AAL57526.1 unknown Not tested LEE Protein 3e-91 99
unnamed AAL57587.1 unknown Not tested LEE Protein 3e-91 99
st08 CAC81846.1 ST08 protein Not tested LEE II Protein 3e-91 99
unnamed CAI43890.1 hypothetical protein Not tested LEE Protein 3e-91 99
ECO111_3768 YP_003236104.1 T3SS component Virulence LEE Protein 6e-84 92
unnamed ACU09474.1 conserved hypothetical protein Not tested LEE Protein 3e-75 91
unnamed AAC38368.1 Orf5 Not tested LEE Protein 1e-83 91
ECs4584 NP_312611.1 hypothetical protein Not tested LEE Protein 2e-83 91
unnamed AAC31529.1 L0050 Not tested LEE Protein 1e-83 91
Z5136 NP_290284.1 hypothetical protein Not tested LEE Protein 2e-68 90
unnamed AAL06353.1 unknown Not tested LEE Protein 1e-74 76
escL AFO66399.1 putative LEE-encoded putative type III secretion system factor Not tested SESS LEE Protein 6e-40 45
escL AFO66316.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 7e-39 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3634 YP_003223491.1 T3SS component VFG0714 Protein 6e-84 91
ECO103_3634 YP_003223491.1 T3SS component VFG0828 Protein 6e-69 90