Gene Information

Name : grlA (ECO103_3627)
Accession : YP_003223484.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : positive regulator GrlA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3703673 - 3704086 bp
Length : 414 bp
Strand : -
Note : Integrative element ECO103_IE03

DNA sequence :
ATGGAATCTAAAAATAAAAATGGCGACTATGTAATTCCTGACTCAGTAAAGAATTACGATGGTGAGCCTCTGTATATCTT
GGTTTCTCTTTGGTGTAAATTGCAGGAGAAATGGATTTCTCGCAATGATATTGCCGAAGCATTCGGTATAAACCTGAGGA
GAGCATCATTTATTATAACTTATATATCGAGAAGAAAAGAAAAAATTTCATTTCGTGTCAGATATGTTAGTTATGGTAAC
TTGCATTATAAGCGCCTTGAGATTTTCATTTATGATGTTAACCTCGAGGCTGTTCCGATAGAAAGTCCGGTATCAACCGG
ACCAAAAAGAAAAAACTACCGAGTCGGTAATGGTATTGTGGGGCAGTCTAATATCTGGAACGAAATGATCATGAGGCGGA
AAAAGGAGAATTAA

Protein sequence :
MESKNKNGDYVIPDSVKNYDGEPLYILVSLWCKLQEKWISRNDIAEAFGINLRRASFIITYISRRKEKISFRVRYVSYGN
LHYKRLEIFIYDVNLEAVPIESPVSTGPKRKNYRVGNGIVGQSNIWNEMIMRRKKEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
grlA YP_003223484.1 positive regulator GrlA Not tested LEE Protein 2e-59 100
unnamed CAI43883.1 hypothetical protein Not tested LEE Protein 6e-59 100
grlA YP_003232144.1 positive regulator GrlA Not tested LEE Protein 5e-59 99
unnamed AAK26706.1 unknown Not tested LEE Protein 3e-59 99
unnamed AAL57533.1 unknown Not tested LEE Protein 1e-58 99
st15 CAC81853.1 ST15 protein Not tested LEE II Protein 1e-58 99
Z5128 NP_290277.1 hypothetical protein Not tested LEE Protein 1e-58 98
ECs4577 NP_312604.1 hypothetical protein Not tested LEE Protein 1e-58 98
unnamed AAC31522.1 L0043 Not tested LEE Protein 9e-59 98
unnamed ACU09467.1 regulatory protein GrlA Virulence LEE Protein 9e-59 98
unnamed AAC38375.1 Orf11 Not tested LEE Protein 2e-58 98
grlA YP_003236097.1 positive regulator GrlA Not tested LEE Protein 3e-58 98
unnamed AAL06360.1 unknown Not tested LEE Protein 9e-55 92
grlA AFO66330.1 putative LEE-encoded positive regulator of transcription Not tested SESS LEE Protein 7e-39 62
grlA AFO66406.1 putative LEE-encoded positive regulator of transcription Virulence SESS LEE Protein 7e-39 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
grlA YP_003223484.1 positive regulator GrlA VFG0721 Protein 8e-59 98
grlA YP_003223484.1 positive regulator GrlA VFG0821 Protein 4e-59 98