Gene Information

Name : cesD (ECO103_3626)
Accession : YP_003223483.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : chaperone CesD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3702832 - 3703287 bp
Length : 456 bp
Strand : +
Note : Integrative element ECO103_IE03

DNA sequence :
ATGAGCAGGAAATTTAGCTCTCTACAGGATATCTATGATTTCTACCAGGATGGTGGTACGTTAGCATCACTGACAAATTT
GACGCAACAAGATCTCAATGATCTTCATTCTTATGCCTATACAGCATATCAATCTGGTGATGTTATAACCGCAAGAAATC
TATTTCATCTGCTAACATATCTGGAGCACTGGAATTATGACTACACCCTATCTCTGGGGTTGTGTCATCAGCGTTTATCA
AATCATGAAGATGCACAACTGTGTTTCGCTCGCTGTGCAACTTTAGTTATGCAAGATCCCAGGGCATCTTATTATTCTGG
GATTAGCTACTTATTGGTCGGAAATCGGAAAATGGCCAAAAAAGCCTTTAAGGCTTGTTTAATGTGGTGTAATGAACAAG
AAAAATACGCTACATATAAAGAAAATATTAAAAAATTGTTAGGTAATACAGATTAA

Protein sequence :
MSRKFSSLQDIYDFYQDGGTLASLTNLTQQDLNDLHSYAYTAYQSGDVITARNLFHLLTYLEHWNYDYTLSLGLCHQRLS
NHEDAQLCFARCATLVMQDPRASYYSGISYLLVGNRKMAKKAFKACLMWCNEQEKYATYKENIKKLLGNTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cesD AAK26707.1 CesD Virulence LEE Protein 2e-65 100
cesD YP_003223483.1 chaperone CesD Not tested LEE Protein 2e-65 100
cesD AAL57534.1 CesD Virulence LEE Protein 2e-65 100
cesD YP_003232145.1 T3SS chaperone CesD Not tested LEE Protein 2e-65 100
cesD CAC81854.1 CesD protein Virulence LEE II Protein 2e-65 100
cesD CAI43882.1 CesD protein Virulence LEE Protein 2e-65 100
cesD AAC31521.1 L0042 Virulence LEE Protein 5e-59 97
cesD YP_003236096.1 chaperone CesD Not tested LEE Protein 8e-59 97
cesD ACU09466.1 CesD protein Virulence LEE Protein 5e-59 97
cesD NP_290276.1 hypothetical protein Virulence LEE Protein 8e-59 97
ECs4576 NP_312603.1 CesD Virulence LEE Protein 8e-59 97
cesD AAC38376.1 CesD Virulence LEE Protein 5e-59 97
unnamed AAL06361.1 CesD Virulence LEE Protein 9e-64 95
cesD AFO66326.1 putative LEE-encoded type III secretion system chaperone Virulence SESS LEE Protein 7e-52 79
cesD AFO66407.1 putative LEE-encoded type III secretion system chaperone Virulence SESS LEE Protein 7e-52 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cesD YP_003223483.1 chaperone CesD VFG0722 Protein 2e-59 97
cesD YP_003223483.1 chaperone CesD VFG0820 Protein 2e-59 97