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Name : sepD (ECO103_3624) Accession : YP_003223481.1 Strain : Escherichia coli 12009 Genome accession: NC_013353 Putative virulence/resistance : Virulence Product : secretion switching protein SepD Function : - COG functional category : - COG ID : - EC number : - Position : 3700825 - 3701280 bp Length : 456 bp Strand : + Note : Integrative element ECO103_IE03 DNA sequence : ATGAACAATAATAATGGCATTGTTAAGAATGATAGTGACTGGCTAACGGCTCTTGATTTTGTAAAAGATGTCAAAGGTTC ACCAAAGCATCTTACTTTTCATATCTATCAAAAAAATGCCTTCTTACACGACTTTGGAAGTTACTGGGTTCTGTATATCG AGCTTAATGGCGATTTTCGCCAGGTTCCAACAGATACCTTCATCAGACTCTGTAATATTCTGGCCGTTAGTAAAGAATAT AAACAAATGGGCATTTTTCAATCTAATAAAAAATGGTATCTTTGCCAACTGTTTAATAAAGATAATAATCATCGCGCAAA CATGTCAAAAGCAATAATGCAACACACACTCGCCTCTTTGCTTGACAAGCAATTTGATAAGTTAGAGCAAGCATCTACAT CAGATACAACGATGCCTCCAACACATTTGTTTTCTGATATAGGACGAATTGTGTAA Protein sequence : MNNNNGIVKNDSDWLTALDFVKDVKGSPKHLTFHIYQKNAFLHDFGSYWVLYIELNGDFRQVPTDTFIRLCNILAVSKEY KQMGIFQSNKKWYLCQLFNKDNNHRANMSKAIMQHTLASLLDKQFDKLEQASTSDTTMPPTHLFSDIGRIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sepD | AAL57536.1 | SepD | Virulence | LEE | Protein | 2e-67 | 100 |
| sepD | YP_003232147.1 | secretion switching protein SepD | Not tested | LEE | Protein | 2e-67 | 100 |
| st18 | CAC81856.1 | ST18 protein | Not tested | LEE II | Protein | 2e-67 | 100 |
| sepD | CAI43880.1 | SepD protein | Virulence | LEE | Protein | 2e-67 | 100 |
| unnamed | AAK26709.1 | unknown | Not tested | LEE | Protein | 2e-67 | 100 |
| sepD | YP_003223481.1 | secretion switching protein SepD | Not tested | LEE | Protein | 2e-67 | 100 |
| sepD | YP_003236094.1 | secretion switching protein SepD | Virulence | LEE | Protein | 7e-63 | 92 |
| unnamed | AAC31519.1 | L0040 | Not tested | LEE | Protein | 3e-62 | 91 |
| Z5125 | NP_290274.1 | hypothetical protein | Not tested | LEE | Protein | 4e-62 | 91 |
| sepD | ACU09464.1 | SepD protein | Virulence | LEE | Protein | 3e-62 | 91 |
| ECs4574 | NP_312601.1 | SepD | Virulence | LEE | Protein | 4e-62 | 91 |
| unnamed | AAC38378.1 | rOrf6 | Not tested | LEE | Protein | 6e-63 | 91 |
| unnamed | AAL06363.1 | SepD | Virulence | LEE | Protein | 7e-61 | 86 |
| sepD | AFO66325.1 | putative LEE-encoded type III secretion system component | Virulence | SESS LEE | Protein | 4e-46 | 59 |
| sepD | AFO66409.1 | putative LEE-encoded type III secretion system component | Virulence | SESS LEE | Protein | 4e-46 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sepD | YP_003223481.1 | secretion switching protein SepD | VFG0724 | Protein | 2e-63 | 91 |
| sepD | YP_003223481.1 | secretion switching protein SepD | VFG0818 | Protein | 1e-62 | 91 |
