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Name : sepQ (ECO103_3615) Accession : YP_003223472.1 Strain : Escherichia coli 12009 Genome accession: NC_013353 Putative virulence/resistance : Virulence Product : T3SS structure protein SepQ Function : - COG functional category : N : Cell motility COG ID : COG1886 EC number : - Position : 3693934 - 3694851 bp Length : 918 bp Strand : - Note : Integrative element ECO103_IE03 DNA sequence : ATGAACCTATTGAATTCTCAATTGAATATGAAAATTAATGATTTTTACTTGCCATTGTTGTCAGTCATAGGAACCGGTCG CCTCTATATTACGCCTGAAGGGCATGCTTGCCATGCATATTTTCGCGAAGTCAGCGGTAATGGTATCCGCTTCACGTTAA CATGCTCAGGCTATGAGGGGCGTTTTTGGATATCAGAAGAACAGTTCATTCAGTGGTGCCAGGAGTTATTCCCGTATAGC GAAAGCCGGCTGATACCGGAAGATATGATAAAACTCATGATCTTATGGGTAATGCAGACTGCTTTACCAGAAGGTGATGT GTCTGTTGATGATGTTCAATTTACGATGCTAAATAAAGATGTTTATCCGGTAATAGAAAATAATAATGGAGAAAACAGAC TTAATGTAATTATACTCGAAATAACGGTACAGAGTTTACAATATCTAATTAATGAAAATTGGCAATTTGTTCCACATTCT AATACCATTTTCTTTGATGGGTATATTGCTCCTGGGTGGACTGATTACCCGGTTACAGAGCTGACTGTTGGTGATAGTTT AAGGCTCTATCATGTTGATGACAGCAAAGAAAGAGAGTGTTGGCTTGTTATTAATAACCCTTTAGCAACCGTAAAACTTT GTGATAATAATTTATTTATTACGGATGTCCAGGCTGCAGATTTGTTATGTGCTATCAGCAATGAGGCTGTAATGGATCGC ATTTATTGTGTGATTGGAACAATTCATGTTGATATACATATGTTGCGCAATGCCAAAAAAGATGATATTATCGATTCAAC TGGATATCATCTTTTTGGTGGGTGCCGGTTAATACGCAATAATACGACTATAGCATACGGGAGCATTGTAAAAATCAACG AAGATTTTTATTTTACTGTTAGTTTAGTATGTGATTAA Protein sequence : MNLLNSQLNMKINDFYLPLLSVIGTGRLYITPEGHACHAYFREVSGNGIRFTLTCSGYEGRFWISEEQFIQWCQELFPYS ESRLIPEDMIKLMILWVMQTALPEGDVSVDDVQFTMLNKDVYPVIENNNGENRLNVIILEITVQSLQYLINENWQFVPHS NTIFFDGYIAPGWTDYPVTELTVGDSLRLYHVDDSKERECWLVINNPLATVKLCDNNLFITDVQAADLLCAISNEAVMDR IYCVIGTIHVDIHMLRNAKKDDIIDSTGYHLFGGCRLIRNNTTIAYGSIVKINEDFYFTVSLVCD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sepQ | YP_003223472.1 | T3SS structure protein SepQ | Virulence | LEE | Protein | 3e-141 | 100 |
| sepQ | CAI43871.1 | SepQ protein | Virulence | LEE | Protein | 2e-141 | 100 |
| sepQ | AAK26718.1 | SepQ | Virulence | LEE | Protein | 8e-140 | 99 |
| sepQ | YP_003232156.1 | T3SS structure protein SepQ | Virulence | LEE | Protein | 5e-141 | 99 |
| sepQ | AAL57545.1 | SepQ | Virulence | LEE | Protein | 8e-140 | 99 |
| sepQ | CAC81865.1 | SepQ protein | Not tested | LEE II | Protein | 4e-141 | 99 |
| sepQ | AAC38386.1 | SepQ | Virulence | LEE | Protein | 6e-130 | 89 |
| sepQ | YP_003236085.1 | T3SS structure protein SepQ | Virulence | LEE | Protein | 4e-129 | 89 |
| sepQ | AAC31510.1 | L0031 | Virulence | LEE | Protein | 2e-128 | 88 |
| sepQ | NP_290265.1 | hypothetical protein | Virulence | LEE | Protein | 2e-128 | 88 |
| sepQ | ACU09455.1 | SepQ protein | Virulence | LEE | Protein | 2e-128 | 88 |
| ECs4565 | NP_312592.1 | SepQ | Virulence | LEE | Protein | 2e-128 | 88 |
| unnamed | AAL06372.1 | SepQ | Virulence | LEE | Protein | 1e-118 | 81 |
| sepQ | AFO66309.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-60 | 41 |
| sepQ | AFO66418.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-60 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sepQ | YP_003223472.1 | T3SS structure protein SepQ | VFG0733 | Protein | 4e-130 | 89 |
| sepQ | YP_003223472.1 | T3SS structure protein SepQ | VFG0809 | Protein | 1e-128 | 88 |
