Gene Information

Name : espH (ECO103_3614)
Accession : YP_003223471.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : T3SS effector EspH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3693388 - 3693903 bp
Length : 516 bp
Strand : -
Note : Integrative element ECO103_IE03

DNA sequence :
ATGTCGTCATCGTTATCAGGAATAATACTCAATACTTCGCTGACAAGCCACCATATGTCATGGGGCAAGTTTAGCAGAAC
TCTTCATGTATTGAATGAAGATATCGTAGATGAAATTCAGCTTAAAGCCCGAACACAACAACGCCACCATCGAGTATATT
CAGAAATGGCGGATTACTCCGTTGTCTCCTTTCGGGGCAAAGAATATTCTGTTCGTTTTATTAAAGATTACAAAACAGAT
AATTATGTGTACAAAGTACAAAAGATGACTCAGGAAAGTGGGTGTCTCTCAAGATTATTTAGCTTTCTTTCTGGCGGTGT
GACTAAGGCTTTGGAAAGTAAACTAAATGAGAGGCATATCACTCCACTTTCTCCAACCTGGTTTCCTCGAACTCCACTGG
AGGGGGTCTTAACGGAAAGAGGATTATCTTCTTTATTACGTTGCGTACAGTCTACTGAAAACCTTGATTATAGTAATGCT
ATGATATCAAACTCTTTCTCTAACTCTGTAGTGTGA

Protein sequence :
MSSSLSGIILNTSLTSHHMSWGKFSRTLHVLNEDIVDEIQLKARTQQRHHRVYSEMADYSVVSFRGKEYSVRFIKDYKTD
NYVYKVQKMTQESGCLSRLFSFLSGGVTKALESKLNERHITPLSPTWFPRTPLEGVLTERGLSSLLRCVQSTENLDYSNA
MISNSFSNSVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43870.1 hypothetical protein Not tested LEE Protein 4e-77 100
espH YP_003223471.1 T3SS effector EspH Virulence LEE Protein 5e-77 100
unnamed AAK26719.1 unknown Not tested LEE Protein 6e-76 99
unnamed AAL57546.1 unknown Not tested LEE Protein 6e-76 99
st28 CAC81866.1 ST28 protein Not tested LEE II Protein 6e-76 99
espH YP_003232157.1 T3SS effector EspH Virulence LEE Protein 9e-76 99
espH YP_003236084.1 T3SS secreted effector EspH Virulence LEE Protein 2e-54 75
Z5115 NP_290264.1 hypothetical protein Not tested LEE Protein 2e-52 74
ECs4564 NP_312591.1 hypothetical protein Not tested LEE Protein 2e-52 74
unnamed AAC31509.1 L0030 Not tested LEE Protein 1e-52 74
unnamed ACU09454.1 hypothetical protein Not tested LEE Protein 1e-52 74
unnamed AAC38387.1 Orf18 Not tested LEE Protein 4e-53 72
unnamed AAL06373.1 unknown Not tested LEE Protein 2e-52 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espH YP_003223471.1 T3SS effector EspH VFG0808 Protein 5e-53 74
espH YP_003223471.1 T3SS effector EspH VFG0734 Protein 2e-53 72