Gene Information

Name : espA (ECO103_3606)
Accession : YP_003223463.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : translocon EspA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3683047 - 3683625 bp
Length : 579 bp
Strand : -
Note : Integrative element ECO103_IE03

DNA sequence : 
ATGGATACATCAACTGCAACATCAGTTGCCAGTGCGAACGCGAGTACTTCGACATCGACAGTCTATGACTTAGGCAGCAT
GTCGAAAGACGAAGTAGTTCAGCTATTTAATGAAGTCGGTGTTTTTCAGGCTGCGCTTCTCATGTTTGCCTATATGTATC
AGGCACAAAGCGATCTGTCGATTGCAAAGTTTGCTGATATGAATGAGGCATCTAAGGAGTCAACCACTGCCCAAAAAATG
GCTAATCTTGTGGATGCTAAAATTGCTGAGGTTCAGAGCAGTTCTAACAAGGATGCGAAAGCCAAACTTCCTCAAGAAGT
GATCGACTATATAAAAGATCCTCGTAATGGCATTACGGTCAGTGATGTAAAAGACATTACTGTTGAATTAGGCGCTGGTG
ATTTGCAAACGGTGAAGGCAGCTATTTCGGCCAAATCGAATAACTTGACCACGGTAGTGAATAATAGCCAGCTTGAAATA
CAGCAAATGTCAAATACGTTAAACTTATTAACGAGTGCACGTGCTGATATTCAGTCACTGCAATACAGAACTATTTCAGC
AATATCCCTTGGTAAATAA

Protein sequence : 
MDTSTATSVASANASTSTSTVYDLGSMSKDEVVQLFNEVGVFQAALLMFAYMYQAQSDLSIAKFADMNEASKESTTAQKM
ANLVDAKIAEVQSSSNKDAKAKLPQEVIDYIKDPRNGITVSDVKDITVELGAGDLQTVKAAISAKSNNLTTVVNNSQLEI
QQMSNTLNLLTSARADIQSLQYRTISAISLGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espA YP_003223463.1 translocon EspA Virulence LEE Protein 5e-74 100
espA CAI43862.1 EspA protein Virulence LEE Protein 3e-74 100
espA AAO66617.1 EspA beta variant Virulence LEE Protein 2e-72 98
espA AAK26727.1 EspA Virulence LEE Protein 2e-69 92
espA YP_003232165.1 translocator EspA Virulence LEE Protein 2e-69 92
espA AAL57554.1 EspA Virulence LEE Protein 2e-69 92
espA CAC81874.1 EspA protein Virulence LEE II Protein 2e-69 92
espA AAC38394.1 EspA Virulence LEE Protein 2e-66 85
espA ACU09446.1 secreted protein EspA Virulence LEE Protein 9e-67 84
ECs4556 NP_312583.1 protein EspA Virulence LEE Protein 1e-66 84
espA YP_003236076.1 translocon EspA Virulence LEE Protein 8e-65 84
espA AAC31501.1 L0022 Virulence LEE Protein 9e-67 84
espA NP_290256.1 hypothetical protein Virulence LEE Protein 1e-66 84
unnamed AAL06381.1 EspA Virulence LEE Protein 2e-64 79
espA AFO66319.1 putative secreted protein EspA Not tested SESS LEE Protein 3e-61 77
espA AFO66389.1 putative secreted protein EspA Virulence SESS LEE Protein 3e-61 77

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espA YP_003223463.1 translocon EspA VFG0742 Protein 8e-67 85
espA YP_003223463.1 translocon EspA VFG0800 Protein 4e-67 84