Gene Information

Name : espB (ECO103_3604)
Accession : YP_003223461.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : translocon EspB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3680927 - 3681871 bp
Length : 945 bp
Strand : -
Note : Integrative element ECO103_IE03

DNA sequence :
ATGAATACTATTGATTATACTAATCAAGTAATGACGGTTAATTCTGTTTCGGAGAATACTACCGGCTCTAATGCAATTAC
CGCATCTGCTATTAATTCATCTTTGCTTACCGATGGTAAGGTCGATGTTTCTAAACTGATGCTGGAAATTCAAAAACTCC
TGGGCAAGATGGTGCGTATATTGCAGGATTACCAACAGCAACAGTTGTCGCAGAGCTATCAGATCCAACTGGCCGTTTTT
GAGAGCCAGAATAAAGCCATTGATGAAAAAAAGGCCGCTGCAACAGCCGCTCTGGTTGGTGGGGCTATTTCATCAGTATT
GGGGATCTTAGGCTCTTTTGCAGCAATTAACAGTGCTACGAAAGGCGCGAGTGATATTGCTCAACAAACCGCCTCTACAT
CTTCTAAGGCTATTGATGCGGCTTCTGATACTGCGACTAAAACGTTGACTAAGGCAACGGAAAGCGTTGCTGATGCTGTT
GAAGATGCATCCAGCGTGATGCAGCAAGCGATGACTACAGCAACGAGAGCGGCCAGCCGTACATCTGACGTTGCAGATGA
CATTGCCGATTCTGCTCAGAGAGCTTCTCAGCTGGCTGAAAACGCTGCAGATGCCGCTCAGAAGGCAAGTCGGGCAAGCC
GCTTTATGGCTGCAGTAGATAAGATTACTGGCTCTACACCATTTATTGCCGTTACCAGTCTTGCCGAAGGCACGAAGACA
TTGCCAACAACGGTATCTGAATCAGTCAAATCTAACCATGAGATTAGCGAACAGCGTTATAAGTCTGTGGAGAACTTCCA
GCAGGGTAATTTGGATCTGTATAAGCAAGAAGTTCGCAGAGCGCAGGATGATATCGCTAGCCGTCTGCGTGATATGACAA
CAGCCGCTCGCGATCTCACTGATCTTCAGAATCGTATGGGTCAATCGGTTCGCTTAGCTGGGTAA

Protein sequence :
MNTIDYTNQVMTVNSVSENTTGSNAITASAINSSLLTDGKVDVSKLMLEIQKLLGKMVRILQDYQQQQLSQSYQIQLAVF
ESQNKAIDEKKAAATAALVGGAISSVLGILGSFAAINSATKGASDIAQQTASTSSKAIDAASDTATKTLTKATESVADAV
EDASSVMQQAMTTATRAASRTSDVADDIADSAQRASQLAENAADAAQKASRASRFMAAVDKITGSTPFIAVTSLAEGTKT
LPTTVSESVKSNHEISEQRYKSVENFQQGNLDLYKQEVRRAQDDIASRLRDMTTAARDLTDLQNRMGQSVRLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
espB YP_003223461.1 translocon EspB Virulence LEE Protein 2e-96 100
espB CAC81876.1 EspB protein Not tested LEE II Protein 9e-96 99
espB AAK26729.1 EspB Virulence LEE Protein 6e-96 99
espB AAL57556.1 EspB Virulence LEE Protein 6e-96 99
espB CAI43860.1 EspB protein Virulence LEE Protein 1e-95 99
espB YP_003232167.1 translocator EspB Virulence LEE Protein 8e-96 99
espB AAC38396.1 EspB Virulence LEE Protein 1e-60 72
espB NP_290254.1 hypothetical protein Virulence LEE Protein 3e-61 70
espB ACU09444.1 secreted protein EspB Virulence LEE Protein 2e-61 70
ECs4554 NP_312581.1 protein EspB Virulence LEE Protein 3e-61 70
espB YP_003236074.1 translocon EspB Virulence LEE Protein 2e-60 70
espB AAC31499.1 L0020 Virulence LEE Protein 1e-60 69
unnamed AAL06383.1 EspB Virulence LEE Protein 7e-61 64
espB AFO66308.1 putative secreted protein EspB Not tested SESS LEE Protein 1e-43 52
espB AFO66387.1 putative secreted protein EspB Virulence SESS LEE Protein 1e-43 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
espB YP_003223461.1 translocon EspB VFG0744 Protein 8e-61 72
espB YP_003223461.1 translocon EspB VFG0798 Protein 1e-61 70