Gene Information

Name : ECO103_3595 (ECO103_3595)
Accession : YP_003223452.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3673505 - 3674347 bp
Length : 843 bp
Strand : +
Note : Integrative element ECO103_IE03

DNA sequence :
ATGTCTGATATCACAGCCTCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATTTGCTCAACCTCAGTCAGCCACAT
TCTGGCTGTACGAAAGAGTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATCTCAGTTATGACGGAAA
GCATTGGCGGTAAAACTGCACTGGACTGGGCCATGAAACAGGATTTTCGCTGCGGCTGCTGGCTGATGGAGAAAACGGAA
ACCGCAATGAAAGCTATCACCCGCAACCTTGACCGCGAAATCTGGCGTGACCTGATGCAACGTTCAGGGATGCTGTCATT
AATGGATGCACAGGCACGTGATACATGGTACCGATCACTGGAGTACGATAATTTTCCGGAAATCAGCGAGGCGAATATCC
TGAGTACGTTTGAACAACTGCACCAGAATAAGGACGAAGTATTTGAGCGAGGTGTGATCAACCTCTTCAGAGGGCTGAGC
TGGAATTACAAAACCAATTGCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAACCTAGTGAGGTGGGACCGGTGGGG
GTTTCATCTTATCACCGGGCAACAGACTGACCGACTCGTCGACCTGGAAAGAATGCTACATCTGTTCAGCGGCAAACCGA
TCCCCGACAACCGGGAAAACATCACTATTCGTCTGGATGGTCACATCCAGTCCGTTCAGGGTAAAGAGCGCTATGAAGAC
GAGATGTTCATCATTAAATACTTTAAGAAGGGATCTGCACACATCACTTTCAAAAGGCTGGAACTGATTGACAGAATTAA
CGATATAATAGCCAGGTACTTTCCTTCTGTGCTCTCAGCCTGA

Protein sequence :
MSDITASRPEVVNGHTDVICSTSVSHILAVRKSTLLQIDTLIRQLAEISVMTESIGGKTALDWAMKQDFRCGCWLMEKTE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINLFRGLS
WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQTDRLVDLERMLHLFSGKPIPDNRENITIRLDGHIQSVQGKERYED
EMFIIKYFKKGSAHITFKRLELIDRINDIIARYFPSVLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 3e-130 100
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 4e-127 97
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 9e-127 97
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 1e-126 96
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 2e-126 96
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 2e-126 96
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 4e-121 91
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 6e-121 90
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 6e-121 90
unnamed AAL57572.1 unknown Not tested LEE Protein 4e-119 89
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 6e-118 89
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-117 85
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-117 85
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 2e-106 85
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 9e-116 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3595 YP_003223452.1 hypothetical protein VFG0666 Protein 7e-127 96
ECO103_3595 YP_003223452.1 hypothetical protein VFG1533 Protein 2e-121 91
ECO103_3595 YP_003223452.1 hypothetical protein VFG1685 Protein 1e-106 85