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Name : ECO103_3429 (ECO103_3429) Accession : YP_003223302.1 Strain : Escherichia coli 12009 Genome accession: NC_013353 Putative virulence/resistance : Virulence Product : type III secretion protein EpaQ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 3497143 - 3497403 bp Length : 261 bp Strand : - Note : - DNA sequence : ATGGACGATATTGTTTTTGCGGGGAATAGGGCGCTGTATCTGATTTTAGTTATGTCTGCAGGACCTATTGAAGTTGCGAC ATTTGTTGGTTTATTGGTAGGGCTTTTTCAAACGGTAACGCAGTTGCAAGAACAGACGTTGCCATTTGGCGTGAAATTAT TGTGCGTAAGTATTTGCTTTTTTTTAATGAGCGGGTGGTATGGTGAAAAATTATATTCATTTGGTATCGAAATGCTGAAT TTAGCATTCGCGAGAGGATAG Protein sequence : MDDIVFAGNRALYLILVMSAGPIEVATFVGLLVGLFQTVTQLQEQTLPFGVKLLCVSICFFLMSGWYGEKLYSFGIEMLN LAFARG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 7e-35 | 99 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 7e-35 | 98 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 8e-23 | 69 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 8e-23 | 69 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 8e-23 | 69 |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 8e-23 | 69 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 2e-25 | 67 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 4e-15 | 51 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 4e-11 | 45 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 2e-10 | 44 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 2e-09 | 42 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 2e-09 | 42 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 2e-09 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO103_3429 | YP_003223302.1 | type III secretion protein EpaQ | VFG0550 | Protein | 2e-23 | 69 |
| ECO103_3429 | YP_003223302.1 | type III secretion protein EpaQ | VFG1013 | Protein | 7e-18 | 67 |
| ECO103_3429 | YP_003223302.1 | type III secretion protein EpaQ | VFG2454 | Protein | 2e-15 | 54 |
| ECO103_3429 | YP_003223302.1 | type III secretion protein EpaQ | VFG1772 | Protein | 2e-19 | 53 |
| ECO103_3429 | YP_003223302.1 | type III secretion protein EpaQ | VFG0395 | Protein | 5e-12 | 46 |
| ECO103_3429 | YP_003223302.1 | type III secretion protein EpaQ | VFG0043 | Protein | 1e-10 | 45 |
| ECO103_3429 | YP_003223302.1 | type III secretion protein EpaQ | VFG0187 | Protein | 7e-08 | 44 |
