Gene Information

Name : ECO103_3415 (ECO103_3415)
Accession : YP_003223294.1
Strain : Escherichia coli 12009
Genome accession: NC_013353
Putative virulence/resistance : Virulence
Product : peptidoglycan-binding-like protein precursor
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 3489096 - 3489470 bp
Length : 375 bp
Strand : +
Note : -

DNA sequence : 
ATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAA
CAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAA
AACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATAT
AACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAA
GAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAACTAG

Protein sequence : 
MFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILY
NHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKYILYIPGLMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 4e-46 91
pilT NP_458636.1 putative membrane protein Virulence SPI-7 Protein 2e-23 51
pilT NP_807847.1 hypothetical protein Virulence SPI-7 Protein 2e-23 51
pilT AAC98888.1 PilT Virulence SPI-7 Protein 2e-23 51
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 6e-14 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 6e-14 41
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 9e-14 41
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 8e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO103_3415 YP_003223294.1 peptidoglycan-binding-like protein precursor VFG0539 Protein 2e-14 41