|
Name : ECO103_2457 (ECO103_2457) Accession : YP_003222371.1 Strain : Escherichia coli 12009 Genome accession: NC_013353 Putative virulence/resistance : Virulence Product : carbohydrate kinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 2464786 - 2465733 bp Length : 948 bp Strand : + Note : - DNA sequence : ATGAAAAGTCAAGTATGCGTTATTGGTTCGTTTAATGTTGATATCATCAGTTATTTGCCGAGGCTTCCCACTATCGGAGA ATCGCTTCTGGCAAGTAATTTTATATTTTCACCGGGGGGAAAAGGTTGTAACCAGGCGCTGGCAGCAAGCTTTGCCGATA CTGATGTTTATTTCATAACAAAAGTAGGTACAGATCACTTTAGTGATTATGCGATCAACTTTATGAATTCGTCTAAGATT TATAAAAGTATAATTTATCAAACGAAAGAAACGCAAACCGGAACTGCCACGATCCTTGTTAATGAAGGTACTGGCGATAA TGTTATTGCGATCTATCCCGGTGCCAACATGACAATGTCGTCCGATGAAATAACTATTCAGAAAGAAGCGATTATTAATT CTGATGTCATACTTCTGCAGCTCGAAACAAATTATACCGCTCTGCAACAAGCGATCACATTGGCGCAAAAAAACAGTATC CCGGTCATTATTAACCCGGCACCCTATAATGATATCGTCAACGAACTTATTCAGGATGTTGATTATATCACCCCCAATGA AACAGAAGCTGGTTTACTGTCCGGCATAGACGTACACGATCTTGAATCAGCTAAACGAGCTGCAGAAGCTATCCACAATA AAGGGGTAAAAAACACCGTTATCACGCTCGGTAGCAAGGGCTCGCTCGCATTTGATGGCAAAAAATTCATTCATTCGCCA GCGTTTCCAGCGGTCGTTAAAAATACGGCAGGAGCCGGGGATGCTTTTAACGGCGCTCTGGCATCAGGACTTGCGAAAGG AAAATCACTGGAATCAGCACTGTGTTATGCCAGCGCCTTTGCATCCCTAGCGGTGGAGACAAGCAATGCTTCCGACATGC CTGAACATGAATCTGTGATACATCGAATTCAGAGTATACATTATCAGCAAACTATTTTTACGCATTAA Protein sequence : MKSQVCVIGSFNVDIISYLPRLPTIGESLLASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKI YKSIIYQTKETQTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQAITLAQKNSI PVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEAIHNKGVKNTVITLGSKGSLAFDGKKFIHSP AFPAVVKNTAGAGDAFNGALASGLAKGKSLESALCYASAFASLAVETSNASDMPEHESVIHRIQSIHYQQTIFTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 3e-143 | 100 |
| orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 4e-58 | 51 |
| ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 3e-58 | 51 |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 8e-58 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO103_2457 | YP_003222371.1 | carbohydrate kinase | VFG0483 | Protein | 2e-58 | 51 |
